Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_L09
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 199 2e-51
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 1.4
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 1.4
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 2.4
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 4.2
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 29 4.2
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 29 4.2
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric ... 29 4.2
AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric ... 29 4.2
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z78198-6|CAB01572.2| 848|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z49132-11|CAA88991.1| 400|Caenorhabditis elegans Hypothetical p... 28 9.7
Z48585-11|CAA88487.1| 400|Caenorhabditis elegans Hypothetical p... 28 9.7
U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 199 bits (486), Expect = 2e-51
Identities = 94/143 (65%), Positives = 118/143 (82%), Gaps = 2/143 (1%)
Frame = +2
Query: 335 GKTFIVQGFGNVGLHTCRYLVRAGATCIGVIEHDGSIYNPDGINPKALEDYRIENGTVVG 514
GKT I+QGFGNVGLHT RYL RAG+ IG+ E+D ++YNPDGI+PK LED++ NGT+
Sbjct: 279 GKTAIIQGFGNVGLHTHRYLHRAGSKVIGIQEYDCAVYNPDGIHPKELEDWKDANGTIKN 338
Query: 515 FPGAKAYEG-ENMLYEKCDILVPAAIEQVINKDNAHRIQAKIIAEAANGPTTPAADXILI 691
FPGAK ++ ++YEKCDI VPAA E+ I+K+NA RIQAKIIAEAANGPTTPAAD IL+
Sbjct: 339 FPGAKNFDPFTELMYEKCDIFVPAACEKSIHKENASRIQAKIIAEAANGPTTPAADRILL 398
Query: 692 DR-NILVIPDLYINAGGVTVSFF 757
R + L+IPD+Y+N+GGVTVS+F
Sbjct: 399 ARGDCLIIPDMYVNSGGVTVSYF 421
Score = 145 bits (352), Expect = 3e-35
Identities = 66/105 (62%), Positives = 79/105 (75%)
Frame = +1
Query: 16 EHELEKITRRFTLELAKKGFIGPGVDVPAPDMGTGEREMSWIADTYAKTVGFQDITLTPA 195
++E+EKITRR +E AKKGF+GPGVDVPAPDMGTGEREM WIADTYA+T+G D +
Sbjct: 173 DYEIEKITRRIAIEFAKKGFLGPGVDVPAPDMGTGEREMGWIADTYAQTIGHLDRDASAC 232
Query: 196 SLANLLTRXGIHGRVSATGRGVFHGLENFINEANYMSMIGTTPGL 330
+ GIHGRVSATGRGV+ GLE F N+A+YM M+G GL
Sbjct: 233 ITGKPIVSGGIHGRVSATGRGVWKGLEVFTNDADYMKMVGLDTGL 277
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +3
Query: 762 WLXNLNHVSYGRLTFKYERESXYHLLESVQ 851
WL NLNHVSYGRLTFKY+ E+ LL SVQ
Sbjct: 423 WLKNLNHVSYGRLTFKYDEEANKMLLASVQ 452
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 481 GLQNRERYGSXXXXXXXXXXXEHALREVRHSCTRRHRTGHKQGQRSQDPS*D-HCGGRQR 657
G Q+ +RY + E+ R ++ + HR KQ + +D + D H GG++
Sbjct: 665 GEQDYDRYNNYRDAENALIEEEYNTRHLKRTTEHPHR---KQPPQKRDNTKDQHRGGKKS 721
Query: 658 SHHTCCRQXPHR 693
SHH R+ HR
Sbjct: 722 SHHH-SRETKHR 732
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 481 GLQNRERYGSXXXXXXXXXXXEHALREVRHSCTRRHRTGHKQGQRSQDPS*D-HCGGRQR 657
G Q+ +RY + E+ R ++ + HR KQ + +D + D H GG++
Sbjct: 887 GEQDYDRYNNYRDAENALIEEEYNTRHLKRTTEHPHR---KQPPQKRDNTKDQHRGGKKS 943
Query: 658 SHHTCCRQXPHR 693
SHH R+ HR
Sbjct: 944 SHHH-SRETKHR 954
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 450 TLMASTLRPWRTTESR--TVR*SVSPALRPTKARTCFTRSATFLYPPPSNRS*TRTTLTG 623
T +ST R TT++ T+R + P T A T T T PPP + T TT
Sbjct: 165 TTRSSTARTVATTKTSPSTLRTTTKPPTTTTIATTRITTKTT-TSPPPFTTTVTTTTSAA 223
Query: 624 SKLRSLRRPPTVPP 665
+ + TVPP
Sbjct: 224 RTIATTTPIKTVPP 237
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 435 TAPFTTLMASTLRPWRTTESRTVR*SVSPALRP-TKARTCFTRSATFLYPPPSNRS*TRT 611
T P TTL ST TTE T + SP+ P T T + S+T + P S S T T
Sbjct: 426 TEPTTTLTTSTAST-STTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTES-TST 483
Query: 612 TLTGSKLRSLRRPPT 656
+ + + S P T
Sbjct: 484 SPSSTVTTSTTAPST 498
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 435 TAPFTTLMASTLRPWRTTESRTVR*SVSPALRP-TKARTCFTRSATFLYPPPSNRS*TRT 611
T P TTL ST TTE T + SP+ P T T + S+T + P S S T T
Sbjct: 426 TEPTTTLTTSTAST-STTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTES-TST 483
Query: 612 TLTGSKLRSLRRPPT 656
+ + + S P T
Sbjct: 484 SPSSTVTTSTTAPST 498
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3
Query: 483 TTESRTVR*SVSPALRPTKARTCFTRSATFLYPPPSNRS*TRTTLTGSKLRSLRRPPT 656
T E +T + +P PT T T SAT L P S+ + T TT T + S PT
Sbjct: 430 TKEPKTTIFTTTPVPCPTTTST--TTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEPT 485
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 518 PGAKAYEGENMLYEKC--DILVPAAIEQVINKDNAHRIQAKIIAEAANGPTTPAADXILI 691
PG Y + C I VP +++++ A R+ +K++ E G T P+ L+
Sbjct: 52 PGTWLYRIDKAQLMPCAQPIQVPPYCDRLLS--TAPRLPSKLLEEKKEGLTLPSPGAFLV 109
Query: 692 DR-NILVIPDLYINAGGVT 745
D+ + ++P L G VT
Sbjct: 110 DQPSETIVPTLVRGGGTVT 128
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 518 PGAKAYEGENMLYEKC--DILVPAAIEQVINKDNAHRIQAKIIAEAANGPTTPAADXILI 691
PG Y + C I VP +++++ A R+ +K++ E G T P+ L+
Sbjct: 602 PGTWLYRIDKAQLMPCAQPIQVPPYCDRLLS--TAPRLPSKLLEEKKEGLTLPSPGAFLV 659
Query: 692 DR-NILVIPDLYINAGGVT 745
D+ + ++P L G VT
Sbjct: 660 DQPSETIVPTLVRGGGTVT 678
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 518 PGAKAYEGENMLYEKC--DILVPAAIEQVINKDNAHRIQAKIIAEAANGPTTPAADXILI 691
PG Y + C I VP +++++ A R+ +K++ E G T P+ L+
Sbjct: 602 PGTWLYRIDKAQLMPCAQPIQVPPYCDRLLS--TAPRLPSKLLEEKKEGLTLPSPGAFLV 659
Query: 692 DR-NILVIPDLYINAGGVT 745
D+ + ++P L G VT
Sbjct: 660 DQPSETIVPTLVRGGGTVT 678
>AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = +2
Query: 461 INPKALEDYRIENGTVVGFPGAKAYEGENMLYEKCDILVPAAIEQVINKDNAHRIQAKII 640
+NP LE+ +I++ T+ A E + ++ E + + AA E+ + +N H K +
Sbjct: 1482 LNPPNLEETKIDDTTINRSKQADKTEEKTIVEE--EPMEEAAAEKTVTAENDHVDAEKTV 1539
Query: 641 AEAANGPTTPAADXILID 694
P T A + ++D
Sbjct: 1540 IAVEIPPATEAEEDEVVD 1557
>AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform b protein.
Length = 1758
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = +2
Query: 461 INPKALEDYRIENGTVVGFPGAKAYEGENMLYEKCDILVPAAIEQVINKDNAHRIQAKII 640
+NP LE+ +I++ T+ A E + ++ E + + AA E+ + +N H K +
Sbjct: 1482 LNPPNLEETKIDDTTINRSKQADKTEEKTIVEE--EPMEEAAAEKTVTAENDHVDAEKTV 1539
Query: 641 AEAANGPTTPAADXILID 694
P T A + ++D
Sbjct: 1540 IAVEIPPATEAEEDEVVD 1557
>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical
protein F52G2.2a protein.
Length = 1319
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 416 IGVIEHDGSIYNPDGINPKALEDYRIENGTVVGF 517
+G++ D SIY D K E R+ N +GF
Sbjct: 785 LGIVVADSSIYGSDNEQSKVFEFERLRNPITLGF 818
>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical
protein F52G2.2b protein.
Length = 1129
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 416 IGVIEHDGSIYNPDGINPKALEDYRIENGTVVGF 517
+G++ D SIY D K E R+ N +GF
Sbjct: 595 LGIVVADSSIYGSDNEQSKVFEFERLRNPITLGF 628
>Z78198-6|CAB01572.2| 848|Caenorhabditis elegans Hypothetical
protein F55C5.7 protein.
Length = 848
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 380 TCRYLVRAGATCIGVIEHDGSIYNPDGINPKALEDYRI 493
T +YLV+A + DGS++N +G+ A++D I
Sbjct: 306 TAKYLVKAEKLYRTYLSLDGSVFNFEGLLTAAMQDPNI 343
>Z49132-11|CAA88991.1| 400|Caenorhabditis elegans Hypothetical
protein ZK673.9 protein.
Length = 400
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 329 WGGKTFIVQGFGNVGLHTCRYLVRAGATCIGVIEHDG-SIYNPDGINPKALED-YRIENG 502
W + I Q FG+ + +Y +TC+GV+ +D + N P + D Y + G
Sbjct: 60 WQVRNTITQLFGSSRIGPTKYPADPRSTCVGVVTYDSDATTNAQLDGPHSFTDLYNVVQG 119
Query: 503 TV 508
++
Sbjct: 120 SL 121
>Z48585-11|CAA88487.1| 400|Caenorhabditis elegans Hypothetical
protein ZK673.9 protein.
Length = 400
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 329 WGGKTFIVQGFGNVGLHTCRYLVRAGATCIGVIEHDG-SIYNPDGINPKALED-YRIENG 502
W + I Q FG+ + +Y +TC+GV+ +D + N P + D Y + G
Sbjct: 60 WQVRNTITQLFGSSRIGPTKYPADPRSTCVGVVTYDSDATTNAQLDGPHSFTDLYNVVQG 119
Query: 503 TV 508
++
Sbjct: 120 SL 121
>U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical
protein T05E8.1 protein.
Length = 893
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 491 IENGTVVGFPGAKAYEGENMLYEKCDILV--PAAIEQVINK-DNAHRIQAK 634
I +GFPG E +++ YE C L ++EQ+I K N +I+ K
Sbjct: 216 IAKWVALGFPGMSDEEPDDIAYENCGFLKIRVFSVEQLIRKMINERKIKKK 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,241,648
Number of Sequences: 27780
Number of extensions: 408077
Number of successful extensions: 1178
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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