Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_L06
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 106 2e-23
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 106 2e-23
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 105 5e-23
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 41 0.001
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 40 0.003
11_01_0472 + 3656471-3656780,3656902-3656996 32 0.54
06_01_0351 + 2537022-2538281 29 3.8
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 29 3.8
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065... 29 5.0
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 29 6.6
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 29 6.6
02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-96... 29 6.6
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 28 8.7
06_01_0350 + 2534422-2535615 28 8.7
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 106 bits (255), Expect = 2e-23
Identities = 48/79 (60%), Positives = 62/79 (78%)
Frame = +1
Query: 517 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 696
L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+
Sbjct: 144 LNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFS 203
Query: 697 PEILDIKPEDLRAXFQAGV 753
PE+LD+ EDL F +GV
Sbjct: 204 PEVLDLTEEDLMEKFASGV 222
Score = 102 bits (245), Expect = 3e-22
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = +2
Query: 101 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 280
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 281 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 379
+ IK H DN N +L+P + GNVG +FT+GDL
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDL 98
Score = 58.0 bits (134), Expect = 9e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +3
Query: 384 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQXSFYPYQDFKG 545
EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ P + KG
Sbjct: 100 EVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKG 153
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 106 bits (255), Expect = 2e-23
Identities = 48/79 (60%), Positives = 62/79 (78%)
Frame = +1
Query: 517 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 696
L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+
Sbjct: 144 LNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFS 203
Query: 697 PEILDIKPEDLRAXFQAGV 753
PE+LD+ EDL F +GV
Sbjct: 204 PEVLDLTEEDLMEKFASGV 222
Score = 102 bits (245), Expect = 3e-22
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = +2
Query: 101 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 280
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 281 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 379
+ IK H DN N +L+P + GNVG +FT+GDL
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDL 98
Score = 58.0 bits (134), Expect = 9e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +3
Query: 384 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQXSFYPYQDFKG 545
EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ P + KG
Sbjct: 100 EVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKG 153
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 105 bits (252), Expect = 5e-23
Identities = 47/79 (59%), Positives = 62/79 (78%)
Frame = +1
Query: 517 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 696
L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+
Sbjct: 144 LNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFS 203
Query: 697 PEILDIKPEDLRAXFQAGV 753
PE+LD+ +DL F +GV
Sbjct: 204 PEVLDLTEDDLMEKFASGV 222
Score = 103 bits (246), Expect = 3e-22
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = +2
Query: 101 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 280
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 281 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDL 379
+ IK H DN N +L+P + GNVG +FT+GDL
Sbjct: 64 RCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDL 98
Score = 58.0 bits (134), Expect = 9e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +3
Query: 384 EVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQXSFYPYQDFKG 545
EVR+++ + KV APAR G +AP+ VV+P NTGL P +TSFFQ P + KG
Sbjct: 100 EVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKG 153
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +2
Query: 59 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 238
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 239 GSS-IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFT 367
SS I L GK M + D L KL ++G+ G FT
Sbjct: 63 SSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFT 107
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 39.9 bits (89), Expect = 0.003
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +2
Query: 71 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS- 247
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 248 IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFT 367
I L GK M + D L KL ++G+ G FT
Sbjct: 203 IFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFT 243
>11_01_0472 + 3656471-3656780,3656902-3656996
Length = 134
Score = 32.3 bits (70), Expect = 0.54
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = +1
Query: 283 SHQRPPGQQSSPRETVATHQGQRWLRVHPRRPRLRSVTNCWRTKSKLQLVLVPLPHCQSS 462
SH+ P S + T R L H RRP L+++ C KS + ++ PL
Sbjct: 24 SHRIDPPPSPSSLRRLLTSPPHRLLSSHGRRPTLQTLPRCRPRKSPPRALIPPLT-ITGR 82
Query: 463 FPPTTPASVQ-RRPLSSRXLSIPTKISKGTIEIINDVH 573
P P +++ P R +S+ + E+ ++
Sbjct: 83 LPFQPPLAIRPSPPAHRRRISVSVSEVEALFELFKSIN 120
>06_01_0351 + 2537022-2538281
Length = 419
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 364 HPRRPRLRSVTNCWRTKSKLQLVLVPLP 447
H R RLR+V WR+ ++++L L+P P
Sbjct: 62 HADRVRLRAVCRPWRSSARVELDLLPPP 89
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +1
Query: 553 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 705
E++ +++P D VG S +++ +++ P+S VV+ +Y+S + A +I
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395
>03_03_0258 -
15905847-15905990,15906088-15906244,15906374-15906504,
15906991-15907126,15907193-15907464,15907874-15908169,
15908279-15908646,15908922-15908987,15909064-15909129,
15909226-15909297,15909391-15909459,15909549-15909620,
15909708-15909776,15909874-15909945,15910046-15910178,
15911223-15911361
Length = 753
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 683 PESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 561
PE LT RP +G+ FN LR ++ +PT G + S+
Sbjct: 358 PEKNEPLTLRPIASGK-FNQLRTISIISPTAKEGLQKTVSM 397
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 26 PHGSRAF---CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPK 172
PH S A CL L+F T R R K T K + II++L+ YP+
Sbjct: 802 PHASSADIDKCLFLEFLMLMTCTTIRNSRSFKFTHKKFGYWMIIEMLNSYPR 853
>03_05_0968 +
29277122-29277445,29278389-29278505,29278957-29279114,
29279678-29279727,29279968-29280161,29280867-29281049,
29281152-29281270,29281383-29281522,29281857-29281937,
29282286-29282389
Length = 489
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 367 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 272
G HEA+ L W+ + GW + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218
>02_01_0135 +
967172-967229,968316-968657,968936-969015,969063-969698,
969819-971527,971563-972514,972821-973273,974303-974497
Length = 1474
Score = 28.7 bits (61), Expect = 6.6
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Frame = +1
Query: 322 ETVATHQGQRWLRV-HPRRPRLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTPASVQRR 498
E TH L + H R+ + NC RT+ K ++ L + P S R+
Sbjct: 167 EEEQTHSTMLPLEIKHDISKRINEIVNCLRTRCKPVQGVLQLEILRQIAMPKHSQSEPRK 226
Query: 499 PLSSRXLSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY 675
P + L+I K+ E N + +L KV + + +L ++ + + + VY
Sbjct: 227 PRQTTSLAIEHKVYGRDTERDNIIELL---TKVKSCDLGVLPLVGVGGVGKTTLARFVY 282
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 445 PHCQSSFPPTTPASVQRRPLSSRXLSIPTKISKGT 549
P + P TP+SV+R SSR L PTK++ T
Sbjct: 47 PPVAAPMSPVTPSSVRR---SSRLLETPTKVTSET 78
>06_01_0350 + 2534422-2535615
Length = 397
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 364 HPRRPRLRSVTNCWRTKSKLQLVLVPLP 447
H R RLR+V WR+ ++L+ L+P P
Sbjct: 30 HGDRVRLRAVCRPWRSSARLERKLLPPP 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,240,049
Number of Sequences: 37544
Number of extensions: 570039
Number of successful extensions: 1635
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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