Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_L06
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   145   3e-35
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    36   0.039
U41033-6|AAA82378.1|  859|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  145 bits (352), Expect = 3e-35
 Identities = 62/95 (65%), Positives = 81/95 (85%)
 Frame = +2

Query: 95  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 274
           M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60

Query: 275 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDL 379
           +RKA++ HL  NP+LEKLLPHI  NVGFVFT+ DL
Sbjct: 61  IRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDL 95



 Score =  129 bits (312), Expect = 2e-30
 Identities = 66/142 (46%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
 Frame = +1

Query: 451 CQSSFPPTTPASVQRRPLSSRXLSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 630
           C    PP        +    + L IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML
Sbjct: 119 CDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNML 178

Query: 631 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAXFQAGV-XXXXXXXXXXVPNYXSAX 807
            ++PFSYGLVV+QVYD GT++ PE+LD+  E+LR  F +GV            P   S  
Sbjct: 179 GVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVA 238

Query: 808 HXLP-XVQKXLXIAAVXXLXLK 870
           H L   +Q  L +AAV  +  K
Sbjct: 239 HSLANGLQNMLGVAAVTDVSFK 260



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 32/58 (55%), Positives = 39/58 (67%)
 Frame = +3

Query: 372 ETSXEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQXSFYPYQDFKG 545
           E   E+R KLLEN+  APA+ GAIAP  V +P  NTG+GPEKTSFFQ    P +  +G
Sbjct: 93  EDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARG 150


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 35.9 bits (79), Expect = 0.039
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +2

Query: 68  RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 247
           R    +L+++ ++ K T K+N   ++   +D+Y   FI    N+ S +   IR   + +S
Sbjct: 6   RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64

Query: 248 IVLMGKNTMMRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFT 367
               GKN ++  A+     +  A  L K    +KG  G +FT
Sbjct: 65  RFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFT 106


>U41033-6|AAA82378.1|  859|Caenorhabditis elegans Hypothetical
           protein K09E3.7 protein.
          Length = 859

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 22/61 (36%), Positives = 28/61 (45%)
 Frame = +1

Query: 436 VPLPHCQSSFPPTTPASVQRRPLSSRXLSIPTKISKGTIEIINDVHILKPGDKVGASEAT 615
           +PL     S PPT PA +   P +S   S+P     G I   N  H + PGD   A+  T
Sbjct: 660 MPLSLPTQSTPPTIPAFIPTIPSTS---SMP-----GIISFPNTRHTIAPGDVAPANSLT 711

Query: 616 L 618
           L
Sbjct: 712 L 712


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +2

Query: 50  LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 163
           L+ K   S ++ +SR+ +EDK +  SN+++K  QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,616,397
Number of Sequences: 27780
Number of extensions: 445394
Number of successful extensions: 1358
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)