Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K18
         (1081 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0103 + 1082077-1082167,1083037-1085477                           31   1.6  
02_04_0017 + 18937774-18937864,18938505-18940945                       31   1.6  
01_06_0662 + 30987187-30987277,30987825-30990214                       30   2.8  
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912     30   2.8  

>04_01_0103 + 1082077-1082167,1083037-1085477
          Length = 843

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 146 DIRGMMDXXRNIXXMSVIAXXDHGXS 223
           ++R +MD   NI  MSVIA  DHG S
Sbjct: 8   ELRRIMDKKNNIRNMSVIAHVDHGKS 33


>02_04_0017 + 18937774-18937864,18938505-18940945
          Length = 843

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 146 DIRGMMDXXRNIXXMSVIAXXDHGXS 223
           ++R +MD   NI  MSVIA  DHG S
Sbjct: 8   ELRRIMDKKNNIRNMSVIAHVDHGKS 33


>01_06_0662 + 30987187-30987277,30987825-30990214
          Length = 826

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 146 DIRGMMDXXRNIXXMSVIAXXDHGXS 223
           ++R +MD   NI  MSV+A  DHG S
Sbjct: 8   EMRRIMDKKHNIRNMSVVAHVDHGKS 33


>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
          Length = 853

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 146 DIRGMMDXXRNIXXMSVIAXXDHGXS 223
           ++R  MD   NI  MSVIA  DHG S
Sbjct: 8   ELRASMDKKDNIRNMSVIAHVDHGKS 33


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,479,588
Number of Sequences: 37544
Number of extensions: 128317
Number of successful extensions: 108
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3222906096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)