Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K18
         (1081 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15805-1|CAA33804.1|  844|Drosophila melanogaster protein ( Dros...    38   0.032
AY075481-1|AAL68292.1|  844|Drosophila melanogaster RE38659p pro...    38   0.032
AE014134-3532|AAF57226.2|  844|Drosophila melanogaster CG2238-PA...    38   0.032
AE014134-3534|AAN11135.1|  832|Drosophila melanogaster CG2238-PC...    30   6.3  
AE014134-3533|AAG22125.2|  832|Drosophila melanogaster CG2238-PB...    30   6.3  

>X15805-1|CAA33804.1|  844|Drosophila melanogaster protein (
           Drosophila DMEF2 genefor the translation elongation
           factor 2. ).
          Length = 844

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = +2

Query: 146 DIRGMMDXXRNIXXMSVIAXXDHGXS 223
           +IRG+MD  RNI  MSVIA  DHG S
Sbjct: 8   EIRGLMDKKRNIRNMSVIAHVDHGKS 33


>AY075481-1|AAL68292.1|  844|Drosophila melanogaster RE38659p
           protein.
          Length = 844

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = +2

Query: 146 DIRGMMDXXRNIXXMSVIAXXDHGXS 223
           +IRG+MD  RNI  MSVIA  DHG S
Sbjct: 8   EIRGLMDKKRNIRNMSVIAHVDHGKS 33


>AE014134-3532|AAF57226.2|  844|Drosophila melanogaster CG2238-PA,
           isoform A protein.
          Length = 844

 Score = 37.5 bits (83), Expect = 0.032
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = +2

Query: 146 DIRGMMDXXRNIXXMSVIAXXDHGXS 223
           +IRG+MD  RNI  MSVIA  DHG S
Sbjct: 8   EIRGLMDKKRNIRNMSVIAHVDHGKS 33


>AE014134-3534|AAN11135.1|  832|Drosophila melanogaster CG2238-PC,
           isoform C protein.
          Length = 832

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +2

Query: 161 MDXXRNIXXMSVIAXXDHGXS 223
           MD  RNI  MSVIA  DHG S
Sbjct: 1   MDKKRNIRNMSVIAHVDHGKS 21


>AE014134-3533|AAG22125.2|  832|Drosophila melanogaster CG2238-PB,
           isoform B protein.
          Length = 832

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +2

Query: 161 MDXXRNIXXMSVIAXXDHGXS 223
           MD  RNI  MSVIA  DHG S
Sbjct: 1   MDKKRNIRNMSVIAHVDHGKS 21


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,643,348
Number of Sequences: 53049
Number of extensions: 216460
Number of successful extensions: 160
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5576340042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)