Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_K13
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46381-10|CAE17898.2| 366|Caenorhabditis elegans Hypothetical p... 31 1.0
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 29 4.1
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 29 4.1
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 29 5.5
>Z46381-10|CAE17898.2| 366|Caenorhabditis elegans Hypothetical
protein M01F1.9 protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 537 QNIPSQNLPIQSVPNVGGQGTLQLPSNAF 623
++I S +LPI+ +P+VG + L LP+N F
Sbjct: 137 EHIKSAHLPIRIIPSVGLETKLSLPANPF 165
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 315 TAPRIENDFEVRRQPPAQHPGFNEHQTRFGLNSPLQSFQQA 437
T R+ N R +PP QHP + HQ++ L+ Q A
Sbjct: 409 TGNRLSNFMPGRHRPPHQHPIHHHHQSQHQLHQHQQYLHHA 449
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 315 TAPRIENDFEVRRQPPAQHPGFNEHQTRFGLNSPLQSFQQA 437
T R+ N R +PP QHP + HQ++ L+ Q A
Sbjct: 376 TGNRLSNFMPGRHRPPHQHPIHHHHQSQHQLHQHQQYLHHA 416
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical protein
C05C9.3 protein.
Length = 1225
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +2
Query: 662 QNNYQQNIRQLSQQTXXXLXQAAPTLPTYQNIPTSQNPPXF 784
Q NYQQN RQ SQQ P LP Q +P P F
Sbjct: 1145 QTNYQQNQRQHSQQQVYKF-HMQPQLP-IQPVPNQVQQPNF 1183
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 299 MRQQQKLTKAAPHAALSRS-RAAEYHHTKHPLSSARRPLTEVFEVFNKAQIDKKKLN 132
M ++++ AA A+ R+ R A+ H HP+ A++ + + AQ+D +N
Sbjct: 1 METAERISAAASAASSRRAKRLAQQAHKTHPVIQAKQNQMYLITTLSPAQVDNSLIN 57
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 299 MRQQQKLTKAAPHAALSRS-RAAEYHHTKHPLSSARRPLTEVFEVFNKAQIDKKKLN 132
M ++++ AA A+ R+ R A+ H HP+ A++ + + AQ+D +N
Sbjct: 1 METAERISAAASAASSRRAKRLAQQAHKTHPVIQAKQNQMYLITTLSPAQVDNSLIN 57
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical protein
M79.1c protein.
Length = 1209
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = -1
Query: 251 SRSRAAEYHHTKHPLSSARRPLTEVFEVFNKAQIDKKKLNTDTELFRIQNF*AGNQNLTG 72
+ S ++ H++H SS L+ V+E K ++ +K+ N DT++ + G + G
Sbjct: 961 NNSTSSAISHSEHADSSETSSLSGVYEERMKPELPRKRSNGDTKVVPVTWIINGEKEPNG 1020
Query: 71 LS 66
++
Sbjct: 1021 MA 1022
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical protein
M79.1b protein.
Length = 1214
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = -1
Query: 251 SRSRAAEYHHTKHPLSSARRPLTEVFEVFNKAQIDKKKLNTDTELFRIQNF*AGNQNLTG 72
+ S ++ H++H SS L+ V+E K ++ +K+ N DT++ + G + G
Sbjct: 966 NNSTSSAISHSEHADSSETSSLSGVYEERMKPELPRKRSNGDTKVVPVTWIINGEKEPNG 1025
Query: 71 LS 66
++
Sbjct: 1026 MA 1027
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical protein
M79.1a protein.
Length = 1224
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = -1
Query: 251 SRSRAAEYHHTKHPLSSARRPLTEVFEVFNKAQIDKKKLNTDTELFRIQNF*AGNQNLTG 72
+ S ++ H++H SS L+ V+E K ++ +K+ N DT++ + G + G
Sbjct: 976 NNSTSSAISHSEHADSSETSSLSGVYEERMKPELPRKRSNGDTKVVPVTWIINGEKEPNG 1035
Query: 71 LS 66
++
Sbjct: 1036 MA 1037
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,075,759
Number of Sequences: 27780
Number of extensions: 338343
Number of successful extensions: 1014
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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