Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_K11
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.29
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 29 1.2
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 28 2.0
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 27 4.7
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.1
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 26 6.1
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 26 8.1
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 8.1
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 26 8.1
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 8.1
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 0.29
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Frame = +2
Query: 299 DENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEV 478
DEN +++ L+ L + + + E + EK + ++K D+ +E ALR F ++
Sbjct: 658 DENNDLRTKLLKLE-----ESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALR--FSKL 710
Query: 479 SDGIGKWYARTEQINELQASLQHFQENFGAQIQKLNETLHFIKPADTIAXPSVEETQNK- 655
+ + E+ +L+ E AQ L+ +L K + I + ++
Sbjct: 711 E---------AKNLREVIDNLKGKHETLEAQRNDLHSSLSDAKNTNAILSSELTKSSEDV 761
Query: 656 ----ASFETIESGLKSLKTXSIAVLXSYLKVSN 742
A+ ET+ K++K +++ SY +SN
Sbjct: 762 KRLTANVETLTQDSKAMKQSFTSLVNSYQSISN 794
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +2
Query: 257 KPSLKSDLENVEVPDENEEIK----RPLVDLRNPGPPQHQEHETQNPEHHEDA--EKIVS 418
K S D N++ + + K +P D RN GP Q + + + PE H ++ E+ +
Sbjct: 126 KESTNLDNSNMDESENQKNFKIEEPKPSGDFRNEGPKQCDDSKIEKPELHVNSKIEEPIH 185
Query: 419 SVKNDINTAE 448
+ ++ N E
Sbjct: 186 RIDSEHNEPE 195
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 342 IPGPRSIKSTKHRTLNTTKMLKKSFLPSKMTLTQRK 449
+P P S+ HR+LN K+ F P + T++K
Sbjct: 224 LPSPVSLSRYMHRSLNWKKLYDIGFAPFPLGSTEKK 259
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 353 PQHQEHETQNPEHHEDAEKIVSSVKNDIN 439
P +++ T++ E HED + V +++D N
Sbjct: 24 PNNKKSRTRSTESHEDRQAKVQKIQSDFN 52
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 275 DLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 421
D E+ + P + E K P + GP + H+ +H+E E+ + S
Sbjct: 388 DKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHQGPKEKHNERPEQNMQS 436
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 260 PSLKSDLENVEVPDENEEIKRPLVDLRNPGPPQHQEHETQN 382
PS K E +++ E I + VD+ NPG + ET N
Sbjct: 40 PSSKFQNEPLQLNSEESSIMQRYVDMLNPGATFVNDSETFN 80
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +2
Query: 350 PPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQ 517
PP H ++ TQ HEDA+ S + + I R ++ G + EQ
Sbjct: 609 PPLHLKNTTQTNNAHEDAQSSNLSQNHSLFYERIPQRPSYRIEKQNKGIYEDENEQ 664
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.8 bits (54), Expect = 8.1
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 410 IVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQASLQHFQENFGAQIQKL-N 586
++SS N + + A G +++ D + EQ+ L + E FG ++Q++
Sbjct: 1 MISSFSNGFWSKDYAT--GVKKLFDCLDNGVEENEQVKNLLKLYKEANEEFGEKLQEITK 58
Query: 587 ETLHFIKPADTIAXPSVEETQNKASFETIES 679
E L KP +T T NKA FE + S
Sbjct: 59 ECLKGKKPENT----EDGATSNKA-FEGLRS 84
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 351 PRSIKSTKHRTLNTTKMLKKSFLPSKMTLTQRK---SLFVKASRKCQTVLENGTLVPSKL 521
P + ST + ++ K+S+ S + +K SLF+K ++ + T P K
Sbjct: 506 PPTASSTTNNPSSSQINQKRSYSTSSLFSKNKKMNRSLFLKGGKRFFSAEAQKTQKPLKA 565
Query: 522 TSSRPA 539
SS+PA
Sbjct: 566 VSSKPA 571
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 509 TEQINELQASLQHFQENFGAQIQKLNETL 595
+ ++N+LQ ++ + F QI+KLN +
Sbjct: 111 SHEVNDLQTDRENLKHQFEDQIEKLNSEI 139
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,940,726
Number of Sequences: 5004
Number of extensions: 53004
Number of successful extensions: 203
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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