Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K09
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0367 - 17236838-17236852,17237051-17237152,17237246-17238283     30   2.6  
04_03_0902 + 20707834-20708187                                         29   3.5  
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473...    29   6.1  
06_01_0082 + 656362-657798                                             29   6.1  
05_04_0090 + 17833897-17834364                                         28   8.1  

>10_08_0367 - 17236838-17236852,17237051-17237152,17237246-17238283
          Length = 384

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -2

Query: 753 GPVGAPDAQEWXXRTPAXGQPG*QAPRTTVQKQPGYAGRSSGLW 622
           GP G+P +      +   G  G  AP  T+   P    RSS LW
Sbjct: 230 GPAGSPASAAAKEPSQIIGDGGLVAPPYTISSSPARKSRSSTLW 273


>04_03_0902 + 20707834-20708187
          Length = 117

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -2

Query: 318 HR-PKWRVRPHANRPSHTQSNMD-TDLYGPAPKRKREGPTP 202
           HR P    +P   R SHT++N   T LY P P      PTP
Sbjct: 39  HRLPSHPDKPPPYRNSHTKTNTPRTPLYAPPPPLPHTSPTP 79


>07_01_0633 -
           4735298-4735485,4736083-4736114,4736203-4736297,
           4736414-4736487,4736682-4736817,4736902-4736965,
           4737101-4737166,4737265-4737446,4737824-4737948,
           4738031-4738169,4738250-4738369,4738675-4738746,
           4738900-4738935,4739633-4739749,4739821-4739953,
           4740053-4740156,4740243-4740370,4740880-4741010,
           4741561-4741757,4743906-4744583
          Length = 938

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -2

Query: 756 RGPVGAPDAQEWXXRTPAXGQPG*QA---PRTTVQKQPGYAGRSSG 628
           RGP+G  D +    R PA G+ G +    P+   Q+QPGY GR  G
Sbjct: 14  RGPLGGRDGR---GRGPAGGRGGGRGGGHPQQQQQQQPGY-GRGDG 55


>06_01_0082 + 656362-657798
          Length = 478

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = -1

Query: 439 AHEHKHKPTSLSHPRVSLSQNGGYRPQQIIKRHYRTLVSLSQT*MAGPPSRKSAVSHAIQ 260
           A +  H+ T L  P    SQ     P  + +RHY+   SLS++  + PPS   AVS A++
Sbjct: 67  ADDSSHRATLLL-PDSPHSQASPLSPSAL-RRHYK---SLSESLRSAPPSSSPAVSSAVK 121


>05_04_0090 + 17833897-17834364
          Length = 155

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -1

Query: 355 IIKRHYRTLVSLSQT*MAGPPSRKSAVSHAIQYGHRPIWTGTQEEARGA 209
           I K  Y+  VS  +  + GP  R S  +   Q G R  W+G     RGA
Sbjct: 8   IDKEQYKLHVSQCRPLVVGPTHRFSPGAVQAQVGGRRTWSGAAGVGRGA 56


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,444,438
Number of Sequences: 37544
Number of extensions: 488640
Number of successful extensions: 1199
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)