Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K09
         (841 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123032-1|BAC85519.1|  274|Homo sapiens  factor.  protein.            25   9.2  

>AK123032-1|BAC85519.1|  274|Homo sapiens  factor.  protein.
          Length = 274

 Score = 24.6 bits (51), Expect(2) = 9.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 414 VGLCLCSCACV 446
           V LC+C CACV
Sbjct: 12  VSLCVCVCACV 22



 Score = 24.2 bits (50), Expect(2) = 9.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 420 LCLCSCACVNIFA 458
           +C+C CAC N+ A
Sbjct: 38  MCMCVCACGNLHA 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,320,815
Number of Sequences: 237096
Number of extensions: 2522098
Number of successful extensions: 6887
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6857
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)