Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K09
         (841 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024877-12|AAF60902.1|  128|Caenorhabditis elegans Hypothetical...    33   0.19 
Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical...    29   5.4  
AF036705-3|AAB95171.1|  556|Caenorhabditis elegans Hypothetical ...    28   7.2  
Z82268-5|CAB05195.1|  304|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z75710-3|CAB00026.1|  275|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U64834-4|AAB04825.2|  238|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>AC024877-12|AAF60902.1|  128|Caenorhabditis elegans Hypothetical
           protein Y95B8A.2 protein.
          Length = 128

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 279 PSHTQSNMDTDLYGPAPKRK-REGPTPRRAK 190
           P+ T  + +TD+  PAPK K R  PTPRRA+
Sbjct: 83  PAPTNEDYNTDIDVPAPKAKARAAPTPRRAQ 113


>Z81138-4|CAB03474.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.6 protein.
          Length = 304

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -2

Query: 753 GPVGAPDAQEWXXRTPAXGQPG*QAPRTTVQKQPGYAG 640
           GP GAP A     +  A GQPG  A   +    PG AG
Sbjct: 189 GPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAG 226


>Z81138-3|CAB63321.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.5 protein.
          Length = 304

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -2

Query: 753 GPVGAPDAQEWXXRTPAXGQPG*QAPRTTVQKQPGYAG 640
           GP GAP A     +  A GQPG  A   +    PG AG
Sbjct: 189 GPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAG 226


>Z81138-1|CAB03475.1|  304|Caenorhabditis elegans Hypothetical
           protein W05B2.1 protein.
          Length = 304

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -2

Query: 753 GPVGAPDAQEWXXRTPAXGQPG*QAPRTTVQKQPGYAG 640
           GP GAP A     +  A GQPG  A   +    PG AG
Sbjct: 189 GPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAG 226


>AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical
           protein W08E12.1 protein.
          Length = 228

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 484 HCSKLYYYHAKIFTHAH-EHKHKPTSLSH 401
           HC+  Y+ HA++  H H  H H P S  H
Sbjct: 10  HCNYSYHEHAELNPHDHYHHHHYPHSSVH 38


>AF036705-3|AAB95171.1|  556|Caenorhabditis elegans Hypothetical
           protein F37C4.5a protein.
          Length = 556

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -3

Query: 353 YKTSLSHTSVTVTDLNGGSALTQIGRLTRNPIWTPTYMDRHPRGSERGRLHV 198
           ++ S  + S+ V    GG+A   I     N  WTP Y  R   G E   +HV
Sbjct: 193 WRNSAQYASIIVESEAGGAAQLTITYQVNNVSWTPFYDIRVTAGVE-AEMHV 243


>Z82268-5|CAB05195.1|  304|Caenorhabditis elegans Hypothetical
           protein F52B11.4 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 753 GPVGAPDAQEWXXRTPAXGQPG*QAPRTTVQKQPGYAG 640
           GP GA  A     +  A GQPG  A   ++   PG AG
Sbjct: 189 GPKGASGAPGNPGQAGAPGQPGADAQSESIPGAPGQAG 226


>Z75710-3|CAB00026.1|  275|Caenorhabditis elegans Hypothetical
           protein D1081.5 protein.
          Length = 275

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 113 TRGSDTPIETQYT*MTENKEITERTSVLD 27
           +RGS   IE +   M++ + ITE TS+LD
Sbjct: 104 SRGSPDDIENENLSMSKIRSITEETSILD 132


>U64834-4|AAB04825.2|  238|Caenorhabditis elegans Hypothetical
           protein F54D11.3 protein.
          Length = 238

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -3

Query: 356 NYKTSLSHTSVTVTDLNGGSALTQIGRLTRNPIWTPTYMDRHPRGSERGRLHVELNS 186
           NYK S+S T   V  ++G     +I    R  +W  T   +  R SE  RL  + N+
Sbjct: 53  NYKPSISGTGGFVFFVHGDRKTYKILDTDRLALWEDTAATKDVRMSEETRLRFDQNN 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,350,130
Number of Sequences: 27780
Number of extensions: 362238
Number of successful extensions: 997
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)