Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K09
         (841 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   2.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   4.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   8.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   8.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   8.1  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -3

Query: 281 GRLTRNPIWTPT-YMDRHPRGSERG 210
           G+  R+ IWTPT Y+   P  +  G
Sbjct: 90  GQFVRDLIWTPTVYVSNEPSSAITG 114


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 242 MDRHPRGSERGRLHVELNSAFALVTPLTQQDG 147
           +D+HP    RG+L  ++ S    + P+   +G
Sbjct: 387 VDKHPNRRARGQLRTKIESGEGTI-PVKSSEG 417


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +3

Query: 672 SSAPVTPVDXWLVSXLPIPVRRGLRLDP 755
           SS PV+PV       L IPVR  L L P
Sbjct: 439 SSNPVSPVPSPDPLDLAIPVRETLILPP 466


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 96  TNRNTIHLNDGK*RNNGTHVC 34
           +N  TI +N+G      THVC
Sbjct: 373 SNEETIDINNGAELMQETHVC 393


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 700 WSTGVTGAEDDSPEATGICRP 638
           W TGVT  E   P A  I +P
Sbjct: 334 WVTGVTSEEGLYPVAEFIAKP 354


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 225 RKREGPTPRR 196
           RK++GPTPR+
Sbjct: 173 RKKKGPTPRQ 182


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 700 WSTGVTGAEDDSPEATGICRP 638
           W TGVT  E   P A  I +P
Sbjct: 334 WVTGVTSEEGLYPVAEFIAKP 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,380
Number of Sequences: 438
Number of extensions: 4281
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)