Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K07
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0599 - 26516854-26517452,26517547-26517963,26518044-265183...    29   4.6  
09_01_0115 - 1761037-1761082,1761276-1761355,1761437-1761616,176...    28   8.1  

>04_04_0599 -
           26516854-26517452,26517547-26517963,26518044-26518394,
           26518651-26518748,26518875-26518945,26519638-26520318
          Length = 738

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -2

Query: 518 IDSASTGHASSSFTALELLMSAFDITNDESRSASLRPSNFC*V--GEMATDAARLG 357
           +      HA  +  +++L +  FD TN+      L P+N C     E+A +A R G
Sbjct: 306 VQEEDINHALFNLFSVQLRLGFFDKTNENQWFTQLGPNNVCTTEHRELAAEAVRQG 361


>09_01_0115 -
           1761037-1761082,1761276-1761355,1761437-1761616,
           1761819-1761920,1763097-1763249,1764005-1764133,
           1764911-1765050,1766003-1766077,1768741-1768914,
           1769016-1769085
          Length = 382

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 380 ATDAARLGNNCSVCWIRLAASTVARPSST*CRIDVXPW 267
           A D A L  N S+CW+RL+    A   +  CR+    W
Sbjct: 289 AHDKATLLANRSLCWLRLSTGNGALADANMCRMLRPSW 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,166,765
Number of Sequences: 37544
Number of extensions: 330028
Number of successful extensions: 625
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)