Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K07
         (840 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL357148-2|CAI16568.1| 1460|Homo sapiens ankyrin repeat domain 3...    31   5.2  
AL357148-1|CAI16567.1| 1341|Homo sapiens breast cancer antigen N...    31   5.2  
AL157387-4|CAH71319.1| 1460|Homo sapiens ankyrin repeat domain 3...    31   5.2  
AL157387-3|CAH71320.1| 1341|Homo sapiens breast cancer antigen N...    31   5.2  
AF269087-1|AAK27325.1| 1341|Homo sapiens breast cancer antigen N...    31   5.2  

>AL357148-2|CAI16568.1| 1460|Homo sapiens ankyrin repeat domain 30A
           protein.
          Length = 1460

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 153 RRTIDLNYENKKRANSLKWIAVNGILFAI-FIYDLSCK---CPGXHINPALC*ARPCYGT 320
           ++TI+LN ++ ++  +L W  VNG    + F+ D  C+     G H  P L  A  C+  
Sbjct: 5   KKTINLNIQDAQKRTALHWACVNGHEEVVTFLVDRKCQLDVLDGEHRTP-LMKALQCHQE 63

Query: 321 GC 326
            C
Sbjct: 64  AC 65


>AL357148-1|CAI16567.1| 1341|Homo sapiens breast cancer antigen
           NY-BR-1 protein.
          Length = 1341

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 153 RRTIDLNYENKKRANSLKWIAVNGILFAI-FIYDLSCK---CPGXHINPALC*ARPCYGT 320
           ++TI+LN ++ ++  +L W  VNG    + F+ D  C+     G H  P L  A  C+  
Sbjct: 5   KKTINLNIQDAQKRTALHWACVNGHEEVVTFLVDRKCQLDVLDGEHRTP-LMKALQCHQE 63

Query: 321 GC 326
            C
Sbjct: 64  AC 65


>AL157387-4|CAH71319.1| 1460|Homo sapiens ankyrin repeat domain 30A
           protein.
          Length = 1460

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 153 RRTIDLNYENKKRANSLKWIAVNGILFAI-FIYDLSCK---CPGXHINPALC*ARPCYGT 320
           ++TI+LN ++ ++  +L W  VNG    + F+ D  C+     G H  P L  A  C+  
Sbjct: 5   KKTINLNIQDAQKRTALHWACVNGHEEVVTFLVDRKCQLDVLDGEHRTP-LMKALQCHQE 63

Query: 321 GC 326
            C
Sbjct: 64  AC 65


>AL157387-3|CAH71320.1| 1341|Homo sapiens breast cancer antigen
           NY-BR-1 protein.
          Length = 1341

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 153 RRTIDLNYENKKRANSLKWIAVNGILFAI-FIYDLSCK---CPGXHINPALC*ARPCYGT 320
           ++TI+LN ++ ++  +L W  VNG    + F+ D  C+     G H  P L  A  C+  
Sbjct: 5   KKTINLNIQDAQKRTALHWACVNGHEEVVTFLVDRKCQLDVLDGEHRTP-LMKALQCHQE 63

Query: 321 GC 326
            C
Sbjct: 64  AC 65


>AF269087-1|AAK27325.1| 1341|Homo sapiens breast cancer antigen
           NY-BR-1 protein.
          Length = 1341

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 153 RRTIDLNYENKKRANSLKWIAVNGILFAI-FIYDLSCK---CPGXHINPALC*ARPCYGT 320
           ++TI+LN ++ ++  +L W  VNG    + F+ D  C+     G H  P L  A  C+  
Sbjct: 5   KKTINLNIQDAQKRTALHWACVNGHEEVVTFLVDRKCQLDVLDGEHRTP-LMKALQCHQE 63

Query: 321 GC 326
            C
Sbjct: 64  AC 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,964,819
Number of Sequences: 237096
Number of extensions: 1907348
Number of successful extensions: 2807
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2807
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)