Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K07
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2888|AAN11705.1|  538|Drosophila melanogaster CG6479-PB...    36   0.091
AY060826-1|AAL28374.1|  542|Drosophila melanogaster GM01209p pro...    35   0.16 
AE014296-2887|AAF49357.1|  542|Drosophila melanogaster CG6479-PA...    35   0.16 

>AE014296-2888|AAN11705.1|  538|Drosophila melanogaster CG6479-PB,
           isoform B protein.
          Length = 538

 Score = 35.5 bits (78), Expect = 0.091
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 114 IIEMSLSPNSSLVRRTIDLNYENKKRANSLKWIAVNGILFAIFIYDLSCKC 266
           ++   LS N  +V+R++DL  +  +  + LKW ++N +L ++ ++DL   C
Sbjct: 2   LLSSPLSKNP-VVQRSLDLRLQGAQARHYLKWCSINVVLLSLLLFDLWQAC 51


>AY060826-1|AAL28374.1|  542|Drosophila melanogaster GM01209p
           protein.
          Length = 542

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +3

Query: 129 LSPNSSLVRRTIDLNYENKKRANSLKWIAVNGILFAIFIYDLSCKC 266
           LS N  +V+R++DL  +  +  + LKW ++N +L ++ ++DL   C
Sbjct: 11  LSKNP-VVQRSLDLRLQGAQARHYLKWCSINVVLLSLLLFDLWQAC 55


>AE014296-2887|AAF49357.1|  542|Drosophila melanogaster CG6479-PA,
           isoform A protein.
          Length = 542

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +3

Query: 129 LSPNSSLVRRTIDLNYENKKRANSLKWIAVNGILFAIFIYDLSCKC 266
           LS N  +V+R++DL  +  +  + LKW ++N +L ++ ++DL   C
Sbjct: 11  LSKNP-VVQRSLDLRLQGAQARHYLKWCSINVVLLSLLLFDLWQAC 55


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,101,827
Number of Sequences: 53049
Number of extensions: 592195
Number of successful extensions: 1319
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)