Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_K06
(838 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 55 1e-08
SPAC1006.02 |||WD repeat protein, human GNB1L family|Schizosacch... 46 7e-06
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 42 1e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 41 2e-04
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 40 6e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 37 0.004
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 36 0.005
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 34 0.022
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 33 0.050
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 33 0.066
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 32 0.088
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 32 0.088
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 31 0.15
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 31 0.27
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 31 0.27
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 30 0.35
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 30 0.35
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 30 0.35
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 30 0.47
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 30 0.47
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 30 0.47
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 30 0.47
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 29 0.62
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 29 0.82
SPAC1002.01 ||SPAC1610.05|conserved fungal protein|Schizosacchar... 29 0.82
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 29 1.1
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 28 1.4
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 28 1.4
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 28 1.9
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 28 1.9
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 28 1.9
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 28 1.9
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 28 1.9
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 28 1.9
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 27 2.5
SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces pom... 27 2.5
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 27 3.3
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 27 3.3
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 27 3.3
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 27 3.3
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 4.4
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 27 4.4
SPBC32H8.09 |||WD repeat protein, human WDR8 family|Schizosaccha... 27 4.4
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 27 4.4
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 27 4.4
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 27 4.4
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 26 5.8
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 5.8
SPAC977.10 |sod2||CPA1 sodium ion/proton antiporter |Schizosacch... 26 5.8
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 26 5.8
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 26 7.6
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 26 7.6
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 55.2 bits (127), Expect = 1e-08
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +2
Query: 392 SQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
SQIG RP++ RFS + + SW G VKVW+ + + +Q+ +GHT VS ++P
Sbjct: 167 SQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYP 224
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 24 DDDEVRRSLRQLGEPVCLFGEGPAERRVRLRDLL 125
+D +VR LR+ GEP+ FGE RR RL+ L+
Sbjct: 49 EDSKVREYLRRYGEPITYFGEDALARRQRLQQLM 82
Score = 30.7 bits (66), Expect = 0.27
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 452 LITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAE 574
L T + V +W PL L+GH V FHP +
Sbjct: 238 LATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGD 278
Score = 29.1 bits (62), Expect = 0.82
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 727 PWRSLPGHSPHRVSRAESPPRGRXLATTVFDHSWXLW 837
P L GH RV R P G L + FD +W LW
Sbjct: 257 PLLRLEGHLA-RVGRVAFHPSGDYLVSASFDTTWRLW 292
Score = 29.1 bits (62), Expect = 0.82
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 443 SKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSS 550
++ + TS + G VK+W+ +C+ ++ + GH V S
Sbjct: 405 NRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMS 440
>SPAC1006.02 |||WD repeat protein, human GNB1L
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 368
Score = 46.0 bits (104), Expect = 7e-06
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 428 RFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
R D+K+L T+ W G +V+S APL VLK H+ ++S FHP
Sbjct: 303 RIRSDNKILATAGWDGRGRVYSCQTLAPLAVLKYHSDGINSLAFHP 348
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 440 DSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPK 568
D LIT+ L+KVW A +++L+GHT NVS A FH K
Sbjct: 197 DKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSK 239
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 437 QDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAELP 580
+D+ +S G VKVWS L+ H V+ ++P + P
Sbjct: 152 KDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKP 199
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 666 TMASCAYDGTVHLWNFAS 719
T AS DGTV +W+F S
Sbjct: 156 TFASSCLDGTVKVWSFGS 173
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 41.1 bits (92), Expect = 2e-04
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +2
Query: 311 NSSWLAVCAPPLSRSRNGRRLPLXIYCSQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVW 490
N W+A + + L + C+ G R +S +++ SK L ++S +++W
Sbjct: 65 NKRWIATSSSD-GTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIW 123
Query: 491 SVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
++ LKGHT VSS F+P L
Sbjct: 124 DFEKRCSVRCLKGHTNYVSSIDFNPLGTL 152
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHT 535
G T +S F+ +L++ SW V++W++ D L++L H+
Sbjct: 136 GHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHS 180
Score = 30.3 bits (65), Expect = 0.35
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 386 YCSQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVS 547
YC+ G + ++ S + + + TSS G +K+WS L GH +S
Sbjct: 47 YCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGIS 100
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 39.5 bits (88), Expect = 6e-04
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKA 571
G P+ +FS T+S ++W V APL+V GH +V +FHP A
Sbjct: 443 GHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNA 499
Score = 31.1 bits (67), Expect = 0.20
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 392 SQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
S IG TRP+ S + +++ S G ++WS + + GH + F P
Sbjct: 398 SLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSP 455
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKA 571
G T P+ F T+S ++WS PL+V GH +V TFHP +
Sbjct: 419 GHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNS 475
Score = 33.9 bits (74), Expect = 0.029
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 413 PLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
P+ FS D+K L++ S ++WSV L KGHT V F P
Sbjct: 381 PVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGP 431
Score = 33.1 bits (72), Expect = 0.050
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATF 559
G T+P++ + D + ++ GL+ +W + ++ ++GH N+ S +F
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSF 555
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +2
Query: 374 PLXIYCSQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSA 553
PL ++ + D ++F +S ++T S ++W V ++V GHT V++
Sbjct: 455 PLRVFAGHLSDVDCVTF---HPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAV 511
Query: 554 TFHP 565
P
Sbjct: 512 AIAP 515
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 36.3 bits (80), Expect = 0.005
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQV--LKGHTCNVSSATFHPKAE 574
G R +++C F +++++ LVK+W + +V +GH NVS FHP E
Sbjct: 210 GHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQE 269
Query: 575 L 577
L
Sbjct: 270 L 270
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 425 CRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
C F + +++ S +++W+ + +L GH+ V A FHP +L
Sbjct: 101 CTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDL 151
Score = 26.6 bits (56), Expect = 4.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 675 SCAYDGTVHLWNFASESPMAFVAG 746
SC+ D T+ +WN+ S + +A + G
Sbjct: 112 SCSDDQTIRIWNWQSRNCIAILTG 135
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
G +S C F ++++++S ++VW + +Q + T HPK L
Sbjct: 254 GHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNL 312
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 34.3 bits (75), Expect = 0.022
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 449 MLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAE 574
+++++S+ G ++VW L VL+GH V S T +P +
Sbjct: 589 LIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQ 630
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 455 ITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFH 562
I++ +++W++ LQ L GH+ VS TF+
Sbjct: 633 ISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFN 668
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 33.1 bits (72), Expect = 0.050
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
G + +S C S DS +++SW +++W + GHT +V S + P
Sbjct: 61 GHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISP 115
Score = 30.7 bits (66), Expect = 0.27
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 416 LSFCRFSQ--DSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
+S RFS D+ +++ W VKVW + + GHT VS+ T P L
Sbjct: 151 VSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSL 206
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 32.7 bits (71), Expect = 0.066
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 440 DSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNV 544
+S+ +IT SW +VW++ C VLKGH +V
Sbjct: 108 NSETIITGSWDSTARVWALGQCK--YVLKGHQSSV 140
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 32.3 bits (70), Expect = 0.088
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVS 547
G T P++ R+ + + +SS+ +++W D L +LKGH V+
Sbjct: 267 GHTAPITCVRWGGQN-WIYSSSYDKTIRIWDAKDGKCLHILKGHAARVN 314
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 425 CRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAE 574
C +S DS++L++SS +KVW V L GH V + + P +
Sbjct: 437 CAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQ 486
Score = 30.7 bits (66), Expect = 0.27
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 443 SKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
S L+T S ++W P+ +KGHT VS + P A +
Sbjct: 147 SSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASI 191
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
G + ++ FS D + + T+S+ V++W L L+GH V + + L
Sbjct: 387 GHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRL 445
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.088
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 398 IGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
+G +S C++ D +L T S W + + VLKGH ++ S F P
Sbjct: 103 VGHAGFVSCCKYVDDGHLL-TGSGDKTCMFWDIEQAKAISVLKGHEMDIVSLDFLP 157
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 392 SQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWS 493
S G +S + D ML T SW V++WS
Sbjct: 269 SLTGHENRISSLALTSDGTMLATGSWDECVRLWS 302
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHT 535
G R + C F+ S+ L + S +++W+V +Q L+GHT
Sbjct: 505 GHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHT 549
Score = 30.3 bits (65), Expect = 0.35
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +2
Query: 410 RPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
R ++ + S+D +++ ++S +K+W + VL+GH V + +F+P
Sbjct: 466 RDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNP 517
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 434 SQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
+ DSK LI + S L+ ++ +P ++ +K H V + T P
Sbjct: 70 TSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDP 113
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 449 MLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATF 559
+L T GLVKVW + +GH +S+ F
Sbjct: 117 LLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCF 153
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/43 (23%), Positives = 22/43 (51%)
Frame = +2
Query: 437 QDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
Q++ +L + + V++W + + V +GH+ + TF P
Sbjct: 157 QNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEP 199
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 30.7 bits (66), Expect = 0.27
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 428 RFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAELPSP 586
+FS+D + L ++++W+V D + + TC SS +PK L +P
Sbjct: 245 KFSRDGRYLAVGGQDRILRIWAVLDSEHARSVASETC--SSDPNNPKLNLKAP 295
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 30.7 bits (66), Expect = 0.27
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 377 LXIYCSQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVP--DCAPLQVLKGHTCNVSS 550
L + + G P+ S DSK+L+T S VK+W + DC + + H ++
Sbjct: 566 LKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCH--KSIFAHQDSIME 623
Query: 551 ATFHP 565
TF P
Sbjct: 624 VTFQP 628
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 30.3 bits (65), Expect = 0.35
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 669 MASCAYDGTVHLWNFASESPMAFV 740
+AS A+DG V +WN A PMA +
Sbjct: 300 IASAAHDGCVSIWNTACARPMAVI 323
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 30.3 bits (65), Expect = 0.35
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
G T ++ F D K L TSS G VKVW + +Q H V+ HP
Sbjct: 81 GHTNNVTAIAFHCDGKWLATSSEDGTVKVWDM-RAPSVQRNYDHKSPVNDLLIHP 134
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 425 CRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGH 532
C FS DS L+T+S + ++W + ++ GH
Sbjct: 265 CAFSADSTYLVTASSDHVARLWELSSGETIRQYSGH 300
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 395 QIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCA--PLQVLKGHTCNVSSATFH 562
Q D++ C S D K L + + V+++ + + PL +GHT NV++ FH
Sbjct: 37 QHADSQVNRLC-ISPDKKFLAAAG-NPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFH 92
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 30.3 bits (65), Expect = 0.35
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 416 LSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
LS ++S D + +IT + G +KVW + + HT VS F + +
Sbjct: 342 LSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNV 395
Score = 29.5 bits (63), Expect = 0.62
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
G P+S F+ +L + SW V++W + + + +V S FHP
Sbjct: 465 GHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHP 519
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 29.9 bits (64), Expect = 0.47
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 669 MASCAYDGTVHLWNFASESPMAFVAGTQS 755
+AS +YD T+ LWN A+ +A + G S
Sbjct: 286 LASGSYDATIRLWNLATFQQVALLEGHSS 314
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 440 DSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATF 559
D LI+ S +++W+ + +L GHT +V TF
Sbjct: 322 DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF 361
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.9 bits (64), Expect = 0.47
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
G T P+ FS S +L + S ++ ++ V + L+GH + + F+P +L
Sbjct: 185 GHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDL 243
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 29.9 bits (64), Expect = 0.47
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 431 FSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
FS + +T+S G +KVW+ L GH +V + +HP L
Sbjct: 172 FSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGL 220
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 443 SKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
S L T S +V+ + ++VL+GH +V+ T+HP
Sbjct: 262 SNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVTWHP 302
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 29.9 bits (64), Expect = 0.47
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 473 GLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
G + +WS+P +QV+ GHT V++ F P
Sbjct: 168 GSIWMWSLPSGKVVQVMYGHTAPVNAGKFIP 198
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 29.5 bits (63), Expect = 0.62
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 359 NGRRLPLXIYCSQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTC 538
N R + +Y G L FCR +L++ S + +W + PL+V GHT
Sbjct: 249 NSRFILYKLY-GHSGSVLCLDFCR---RRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTD 304
Query: 539 NV 544
NV
Sbjct: 305 NV 306
Score = 26.2 bits (55), Expect = 5.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 669 MASCAYDGTVHLWNF 713
+ S YDGTV +WNF
Sbjct: 442 IVSGGYDGTVRIWNF 456
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 29.1 bits (62), Expect = 0.82
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +2
Query: 449 MLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKAEL 577
+L++ S+ +++W V L L+GH+ + S + P+ +
Sbjct: 519 ILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNI 561
>SPAC1002.01 ||SPAC1610.05|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 179
Score = 29.1 bits (62), Expect = 0.82
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 470 SGLVKVWSVPDCAPLQVLKGHTCNVSSATFH 562
SGL K +P +PLQ LKG ++ FH
Sbjct: 9 SGLAKTLHIPSRSPLQALKGSFILLNKRKFH 39
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVW 490
G RP+ FSQD + +++S+ +K+W
Sbjct: 308 GHARPIRDLSFSQDGRSFLSTSFDKTIKLW 337
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +2
Query: 407 TRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFH 562
T ++ R+ Q L + +G V++W C + + GHT V + +++
Sbjct: 291 TDTVTSLRWVQRGTHLAVGTHNGSVEIWDAATCKKTRTMSGHTERVGALSWN 342
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 479 VKVWSVPDCAPLQVLKGHTCNVSSATFHPKAE 574
V +W+ P + + LKGHT V P E
Sbjct: 486 VALWNYPSVSRVGTLKGHTDRVLYLAMSPNGE 517
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +2
Query: 401 GDTRPLSFCRFS---QDSKM--LITSSWSGLVKVWSVPDCAPLQVLKGHT 535
G + P++ C+ +D K+ + T SW +K W+V ++ L GHT
Sbjct: 83 GHSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKKWNVSTGECVETLIGHT 132
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 413 PLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFH 562
P++ +F + L T+ G+V W + L+VL N+SS +F+
Sbjct: 235 PVNDLKFHPIHQTLATAGGDGVVAFWDIQVRKRLRVLNPSKINISSISFN 284
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSV--PDCAPLQVLKGHTCNVSS 550
G ++ R+++DS +L + S+ V++W +P+QVL +VSS
Sbjct: 96 GHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQVLADAKDSVSS 147
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHT 535
G RPL+ +++ D +L + + ++ VW + L +GHT
Sbjct: 8 GHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHT 52
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 609 TNGDAMEADGSDDDKSAVCTMASCAYDGTVHLWNF--ASESPMAFVAGTQSAPRVPGRVP 782
T+ + + +G + +++ + +CA D TV WN+ ++E P + T +P R
Sbjct: 407 TSENITKINGLEFNRACETRLLTCAMDRTVKFWNYEKSTEEPEHLI--TTDSPVWKARFT 464
Query: 783 PSG 791
P G
Sbjct: 465 PFG 467
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 431 FSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATF 559
FS D K L+T + +K+W + V GH ++ S F
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDF 410
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +1
Query: 250 IWIARYSLP---NAKKRLNKAREELKLAGSV-RAAAKQESQR 363
+W+A L NAKK LNKAR+ ++ + V AAA+ E Q+
Sbjct: 406 LWLALARLETYENAKKVLNKARQTIRTSHEVWIAAARLEEQQ 447
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 431 FSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVS 547
FS L T+S VKVW + L LKGH+ VS
Sbjct: 340 FSHPFGTLATASTDKTVKVWDMAGVVYLGSLKGHSDYVS 378
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 473 GLVKVWSVPDCAPLQVLKGHTCNVSSATF 559
GL+++W + P++ GHT +SS F
Sbjct: 516 GLIRIWDLRIGLPVRSFIGHTAPISSLQF 544
>SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 304
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 3 LERMLSTD-DDEVRRSLRQLGEPVCLFGEGPAERRVRLRDLLSY 131
++R+ S D DDE + QL E V L GP E LR L Y
Sbjct: 17 IDRLTSRDTDDEDLSGIVQLSEAVNLTVTGPREASRTLRKKLKY 60
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 440 DSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHPKA 571
DSK++I + D P+ LKGH+ V +HP A
Sbjct: 103 DSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRKVGLVQYHPTA 146
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 431 FSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGH 532
F+ D L+T+S V+VW P+ V GH
Sbjct: 184 FNADGTRLVTTSRDKKVRVWDPRTDKPVSVGNGH 217
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 27.1 bits (57), Expect = 3.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 440 DSKMLITSSWSGLVKVW 490
D ++++T SW G +K+W
Sbjct: 115 DRRIVVTGSWDGTIKLW 131
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVP 499
G + L+ FS + L+T+S G ++ W +P
Sbjct: 570 GHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLP 602
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 431 TCRSSAASCPRSGCSKXLKADAFRCDSC 348
T RSS+ +C + C K ++ D+F C C
Sbjct: 54 TLRSSSVAC--NTCLKIIRNDSFHCTKC 79
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 398 IGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSS 550
I + PL+ +Q + G +K+W + + VLKGH ++S
Sbjct: 174 IEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITS 224
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 4.4
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 675 SCAYDGTVHLWNFASESPMAFVAGTQSA 758
+C +G +HLW+ S++ A + TQ +
Sbjct: 72 TCGSEGEIHLWDIRSQAKSAVRSWTQQS 99
>SPBC32H8.09 |||WD repeat protein, human WDR8
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 386 YCSQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSV 496
Y S D PLS +S ++L+ SS+ + VWS+
Sbjct: 93 YASIQCDQDPLSSISWSPSGELLLWSSFDSKITVWSL 129
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 431 FSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATF 559
FS D K L T +++W + ++L GH + S F
Sbjct: 342 FSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDF 384
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 434 SQDSKMLITSSWSGLVKVWSVPDCAPLQV-LKGHTCNVSSATFHP 565
S D K +I+ S ++ WS PD Q+ L+GH +V S P
Sbjct: 521 SPDGKWIISGSKDRTIQFWS-PDSPHSQLTLQGHNNSVISVAVSP 564
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 428 RFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLK--GHTCNVSSATFHPKAEL 577
+FS D + L + S +++WS+ + +P + GH+ V F P E+
Sbjct: 201 KFSSDGRYLCSVSEDRTLRLWSI-ESSPFLIATGFGHSARVWRCVFLPNKEI 251
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 33 EVRRSLRQLGEPVCLFGEGPAERRVRLRDLLSY 131
E+ LR++ EP+ LFGE R LL Y
Sbjct: 128 EIIAKLREMKEPIRLFGESEEATIQRYYSLLKY 160
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 410 RPLSFCRFSQDSKMLITSSWSGLVKVWSV 496
+PL+ +FS D +L T+S G V W +
Sbjct: 119 QPLTILKFSNDGMVLFTASNDGDVFAWLI 147
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = +2
Query: 386 YCSQIGDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFHP 565
Y +G + +S DS+++++ + VW+ L+ ++ H +V TF P
Sbjct: 127 YRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVKGITFDP 186
>SPAC977.10 |sod2||CPA1 sodium ion/proton antiporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 561 WKVALLTLQVWPLSTCRGAQSGTDQTLTSPDQLEVISILLSWLNLQKLSGLVSPI 397
WK AL P+ C + + L SPD++E SI S L+ ++ PI
Sbjct: 359 WKEALFVGHFGPIGVCAVYMAFLAKLLLSPDEIEK-SIYESTTVFSTLNEIIWPI 412
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 407 TRPLSFCRFSQDSKMLITSSWSGLVKVWS 493
T P+S FS + + L T SG V +WS
Sbjct: 475 TAPVSALSFSHNGRYLATGDTSGGVCIWS 503
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/54 (20%), Positives = 27/54 (50%)
Frame = +2
Query: 401 GDTRPLSFCRFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSSATFH 562
G T ++ ++ L + SG++ +W + ++ LKGH+ V++ ++
Sbjct: 164 GATNHVTSVLWTGKGTQLAVGTDSGVIYIWDIESTKSVRSLKGHSERVAALAWN 217
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 428 RFSQDSKMLITSSWSGLVKVWSVPDCAPLQVLKGHTCNVSS 550
RFS + L + +G V +W + + +VL GHT + S
Sbjct: 31 RFSTNGYHLASGLVNGSVVIWDLSTFSVSRVLTGHTRAIQS 71
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,006,703
Number of Sequences: 5004
Number of extensions: 51828
Number of successful extensions: 311
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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