Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_K02
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical...    28   7.3  
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical...    28   7.3  
AF039712-3|AAK21400.3|  393|Caenorhabditis elegans Hypothetical ...    28   9.6  

>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical protein
            H05G16.1 protein.
          Length = 1111

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 376  ELQQLNASLRTLGCTPNAPGWTRAMQLLNDDSVMAEIIEQAPSLGED 516
            + Q +   L    C+P A G T  + +LNDD +  E + ++ SL ED
Sbjct: 945  QTQPVRFDLPPSPCSPTAGGSTPFISILNDD-LFDECVSESRSLHED 990


>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
           protein C09E7.8b protein.
          Length = 1080

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 139 IERHKLENFGLENTVDSLGTEAEKRSNVPSSSLEL 243
           IER KL +  LE  +  L TEA++ + V + SLE+
Sbjct: 742 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM 776


>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
           protein C09E7.8a protein.
          Length = 1114

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 139 IERHKLENFGLENTVDSLGTEAEKRSNVPSSSLEL 243
           IER KL +  LE  +  L TEA++ + V + SLE+
Sbjct: 776 IEREKLCSKQLEKEISQLRTEADEMNIVMTQSLEM 810


>AF039712-3|AAK21400.3|  393|Caenorhabditis elegans Hypothetical
           protein F54D7.2 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 207 FSLSSKRIYCILESKIL*FVTFYWSRFHFYTQKYAW 100
           FS+SS  + C+L S  + F T +W +++      +W
Sbjct: 159 FSISSVELLCVLISTQIVFFTTHWEKYNTGIMFLSW 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,115,208
Number of Sequences: 27780
Number of extensions: 372421
Number of successful extensions: 926
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)