Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_J16
         (817 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0505 + 21545547-21545813,21546075-21546167,21546535-215467...    33   0.36 
06_03_0507 + 21603472-21603750,21604371-21604463,21605046-216053...    29   3.3  
10_01_0354 - 3887790-3890204                                           29   4.4  

>06_03_0505 +
           21545547-21545813,21546075-21546167,21546535-21546747,
           21548933-21549124,21549217-21550197
          Length = 581

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 720 MNIVLNRRETARRNVTELQPWHTHSYRF 637
           +++VL       RNV+E+ PWH H + F
Sbjct: 453 VDVVLQNANALARNVSEVHPWHLHGHDF 480


>06_03_0507 +
           21603472-21603750,21604371-21604463,21605046-21605372,
           21605588-21605863,21606095-21607114
          Length = 664

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 720 MNIVLNRRETARRNVTELQPWHTHSYRF 637
           +++VL      R  V+E  PWH H + F
Sbjct: 525 VDVVLQNANMLREEVSETHPWHLHGHDF 552


>10_01_0354 - 3887790-3890204
          Length = 804

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 481 AAPRGPARDVTTALHLCTYTSSITEGL-QLASLQLVFLVSGCP 606
           A  RG A   +  LH C+  +S++EG+  L +LQ+++ +S CP
Sbjct: 666 AGLRGWASLTSLQLHSCSELTSLSEGIGSLTALQMLW-ISDCP 707


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,850,543
Number of Sequences: 37544
Number of extensions: 428617
Number of successful extensions: 857
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)