Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_J16
         (817 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   0.63 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 12/51 (23%), Positives = 21/51 (41%)
 Frame = -3

Query: 626 VEVCLQYGHPDTKNTSCRDANCSPSVIELVYVHRCSAVVTSRAGPRGAALH 474
           +++ + Y   +T NT C     +PS      VH  +    S+  P   + H
Sbjct: 339 IKISVSYPSTETLNTKCNTLERTPSKCSQTSVHYSNGQTHSQLCPTPRSTH 389


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 572 PCNLYF*CRDVRIVNKPPQVPTN 640
           P + Y+  RD RIVN   Q P N
Sbjct: 141 PYDEYYVWRDARIVNGTRQPPNN 163


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 672 ELQPWHTHSYRFVG 631
           E  PW T SY+ +G
Sbjct: 124 EPPPWETDSYKLIG 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,090
Number of Sequences: 438
Number of extensions: 4783
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)