Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_J09
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   2.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.6  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   8.3  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -1

Query: 156 YNYRGTHFFVITPLNQ*ENSISYYHAISNFL*TPTNRALLSDMPFCVNNK 7
           ++Y+G  +F + P N+  NS+ Y   +     T  N A+    P   N K
Sbjct: 194 WDYKGIVYFELLPPNRTINSVVYIEQL-----TKLNNAVEEKRPELTNRK 238


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +3

Query: 252 SDMGRKMQRKKLKNRVAAQTSRDRRKAKMDEMESQIRDFKEMNERLTSEVESLKAL-NER 428
           SD  +++  KK +N +  +   D  + +  E  +    F+E   R  S ++ +K L N+R
Sbjct: 82  SDNSKEVNDKKEENFIVDRLRNDLFECENKEKSNVCLKFEEQKRRKKS-LDDVKILRNDR 140

Query: 429 LISENTALR 455
           + S  + L+
Sbjct: 141 IDSYKSNLK 149


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 696 STC*VVPAAPASISWRREFASSCKVSMYSSESNCA 592
           S+C    AA A++  +R   S C +   SS S+ A
Sbjct: 154 SSCGPGAAAAAALLSKRRSVSECSLGTASSTSSTA 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,725
Number of Sequences: 438
Number of extensions: 4164
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)