Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_J07
         (808 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004914-1|AAO49167.1|  291|Drosophila melanogaster GM01305p pro...    29   5.7  
AE014297-1223|AAF54570.1|  291|Drosophila melanogaster CG4591-PA...    29   5.7  

>BT004914-1|AAO49167.1|  291|Drosophila melanogaster GM01305p
           protein.
          Length = 291

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
 Frame = +1

Query: 385 NLKRPSLSRFGIGSH---NSTRISLTAILMICGGGPLLYALASSIRMRATAGTAHYLRV- 552
           N   PS+ R G+      N+T IS   + ++CG G  + ++A++ +   T+G    +RV 
Sbjct: 191 NCSSPSVERCGVPYSCCINATDISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVW 250

Query: 553 ---HLGILPRLTILIALIEIY 606
              +L ++  + + IAL++++
Sbjct: 251 VERNLYVIAGVALGIALLQLF 271


>AE014297-1223|AAF54570.1|  291|Drosophila melanogaster CG4591-PA
           protein.
          Length = 291

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
 Frame = +1

Query: 385 NLKRPSLSRFGIGSH---NSTRISLTAILMICGGGPLLYALASSIRMRATAGTAHYLRV- 552
           N   PS+ R G+      N+T IS   + ++CG G  + ++A++ +   T+G    +RV 
Sbjct: 191 NCSSPSVERCGVPYSCCINATDISSGLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVW 250

Query: 553 ---HLGILPRLTILIALIEIY 606
              +L ++  + + IAL++++
Sbjct: 251 VERNLYVIAGVALGIALLQLF 271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,719,701
Number of Sequences: 53049
Number of extensions: 772298
Number of successful extensions: 1957
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1957
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)