Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_J07
         (808 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   1.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   4.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   7.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 127 ICEGRRRCISASQFVSADMDRQRNETPKPK 38
           IC+   +  + S+F  A   ++RN+ P+PK
Sbjct: 6   ICKQILKRSAESEFEGASSPKKRNKNPQPK 35


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 8/53 (15%)
 Frame = -1

Query: 652 FIIELYYEDAVDVDEDKF--------QLGQSGWSVAEVSRDGPADSVLYRPWR 518
           FIIE  Y   +DV + +         QL   G      SRDGP    L  P R
Sbjct: 88  FIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPR 140


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/54 (22%), Positives = 25/54 (46%)
 Frame = +3

Query: 333 SSKACNSRINIVVLEDK*FEATVIISVWHRISQFHSHLTYRNSNDLRRRSPFVC 494
           +S AC S   +  +E+K ++  +    + + + + SHL    S+      P+ C
Sbjct: 44  TSPACGSETPLTNIEEKTYQCLLCQKAFDQKNLYQSHL---RSHGKEGEDPYRC 94


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 390 EATVIISVWHRISQFHSHLT 449
           EA   + V H  SQ H HLT
Sbjct: 657 EAEPAVIVQHTQSQLHLHLT 676


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,014
Number of Sequences: 438
Number of extensions: 5150
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)