Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_J04
         (822 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p pro...   164   1e-40
AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA...   164   1e-40

>AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p
           protein.
          Length = 396

 Score =  164 bits (399), Expect = 1e-40
 Identities = 93/200 (46%), Positives = 121/200 (60%), Gaps = 7/200 (3%)
 Frame = +2

Query: 224 RPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLD 397
           R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P+P++Q A+ +LVTK+Q VLD
Sbjct: 27  RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86

Query: 398 NIVVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEE 577
           N+VVAPG+   CQLEEVRQVGS+KKGT++ G NVAD+VVI+KTLPTKEAV+ L+ KV  +
Sbjct: 87  NLVVAPGDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKVEAD 146

Query: 578 VNKLMKAE---GSGAXVSACHERGFTVTGXLRSRQGXHHNTASEL--XEDRA*CTFRL*S 742
           +   MK E            HERGF +       +         L   E       +L  
Sbjct: 147 LKASMKTEVLTKGDQHTVQIHERGFDIANVHAKVRILIATLPQNLRKLEPEIHLDHKLMQ 206

Query: 743 DXQSSXXDKNSRWFEXNXHH 802
              ++   +++RWFE N HH
Sbjct: 207 SHLAAI--RHTRWFEENAHH 224



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = +3

Query: 663 AAVRVXITTLHQNLXKIEPDVHLDYKVXSSHLXXIK 770
           A VR+ I TL QNL K+EP++HLD+K+  SHL  I+
Sbjct: 178 AKVRILIATLPQNLRKLEPEIHLDHKLMQSHLAAIR 213


>AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA
           protein.
          Length = 396

 Score =  164 bits (399), Expect = 1e-40
 Identities = 93/200 (46%), Positives = 121/200 (60%), Gaps = 7/200 (3%)
 Frame = +2

Query: 224 RPPFDLLLAEPAFPRCKPAP--DDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLD 397
           R PFDL LAE  FP+   A   DDS LT ALLKR+ +L P+P++Q A+ +LVTK+Q VLD
Sbjct: 27  RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86

Query: 398 NIVVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEE 577
           N+VVAPG+   CQLEEVRQVGS+KKGT++ G NVAD+VVI+KTLPTKEAV+ L+ KV  +
Sbjct: 87  NLVVAPGDLTTCQLEEVRQVGSFKKGTILTGNNVADVVVILKTLPTKEAVDALAKKVEAD 146

Query: 578 VNKLMKAE---GSGAXVSACHERGFTVTGXLRSRQGXHHNTASEL--XEDRA*CTFRL*S 742
           +   MK E            HERGF +       +         L   E       +L  
Sbjct: 147 LKASMKTEVLTKGDQHTVQIHERGFDIANVHAKVRILIATLPQNLRKLEPEIHLDHKLMQ 206

Query: 743 DXQSSXXDKNSRWFEXNXHH 802
              ++   +++RWFE N HH
Sbjct: 207 SHLAAI--RHTRWFEENAHH 224



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = +3

Query: 663 AAVRVXITTLHQNLXKIEPDVHLDYKVXSSHLXXIK 770
           A VR+ I TL QNL K+EP++HLD+K+  SHL  I+
Sbjct: 178 AKVRILIATLPQNLRKLEPEIHLDHKLMQSHLAAIR 213


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,165,385
Number of Sequences: 53049
Number of extensions: 651386
Number of successful extensions: 1751
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)