Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_J04
         (822 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93386-4|CAB07644.1|  370|Caenorhabditis elegans Hypothetical pr...    35   0.081
Z79759-2|CAB02137.1|  255|Caenorhabditis elegans Hypothetical pr...    29   5.3  
AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical ...    29   5.3  
Z54284-3|CAA91063.1|  666|Caenorhabditis elegans Hypothetical pr...    28   9.3  

>Z93386-4|CAB07644.1|  370|Caenorhabditis elegans Hypothetical
           protein R11H6.5 protein.
          Length = 370

 Score = 34.7 bits (76), Expect = 0.081
 Identities = 25/98 (25%), Positives = 41/98 (41%)
 Frame = +2

Query: 287 DSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGEFAACQLEEVRQVGSY 466
           D+V  + +L R   L PS   +  +     K+   L+             +  +  VGS+
Sbjct: 38  DAVFEKEILDRAANLTPSVEIRKRINEYAKKVIVALEK-EKREKTLVDIGIATISHVGSF 96

Query: 467 KKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEEV 580
              T     + +D+VV + TLP+ E V  L  KV E +
Sbjct: 97  VTDTTTHSSDKSDVVVQLSTLPSYETVAELGRKVVENM 134


>Z79759-2|CAB02137.1|  255|Caenorhabditis elegans Hypothetical
           protein ZK858.2 protein.
          Length = 255

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 23/90 (25%), Positives = 39/90 (43%)
 Frame = +2

Query: 242 LLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGE 421
           LLA P     +P P    +  + L+  T +  SPTD   +  LVT    +   +++ P +
Sbjct: 17  LLATPPVAIRRPLPYPRDIISSPLEVATPVTVSPTDFMPIRELVTTPYHISTPVLITPVD 76

Query: 422 FAACQLEEVRQVGSYKKGTMMAGKNVADIV 511
             +   E VR     +  T  A ++V + V
Sbjct: 77  ARSISREIVRVNRIRRVRTRQASRSVFNSV 106


>AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical
           protein Y95B8A.7 protein.
          Length = 608

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 452 QVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEEVNKL 589
           +VG   KGT + G   A++V+    +PT   VE +     E    L
Sbjct: 331 RVGIIAKGTFIKGDRCAEVVLTCTPVPTSGLVEQIRRLFGESTTSL 376


>Z54284-3|CAA91063.1|  666|Caenorhabditis elegans Hypothetical
           protein D2085.3 protein.
          Length = 666

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 307 PSKEAHGAMSVTYRSS--SCFEPRHETADSIGQYCCGSRRICSLPTRRSAASWVLQ 468
           P KE H  +++    +    F P HE+       C G+  IC++P    A SW+++
Sbjct: 12  PKKEEHPLVAIVILDAFDQRFAPTHESYP-----CFGTIPICNVPAINFALSWLMR 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,177,823
Number of Sequences: 27780
Number of extensions: 320588
Number of successful extensions: 806
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)