Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_J02
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171...    29   3.6  
03_01_0401 - 3108477-3108689,3108787-3108933,3109022-3109234,310...    29   6.2  
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69...    29   6.2  

>02_05_1059 + 33815979-33816235,33816467-33816732,33817149-33817192,
            33817363-33817539,33817638-33817964,33818067-33818192,
            33818518-33818622,33818815-33820125,33820221-33820382,
            33820416-33820517,33820549-33821272,33821358-33821451,
            33821824-33821986
          Length = 1285

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = +3

Query: 396  LNKCIVISKEQYIQLASENLFYVDRGVLWLSLKLSTNYKNKHKRKKQHN 542
            LNK +    ++ ++  +  +F+  + +L  S+KL  + K KHKR K+H+
Sbjct: 1029 LNKKMNCKSKRQVKYPAVRMFFGPKQLLLASVKL--HKKRKHKRSKKHH 1075


>03_01_0401 -
           3108477-3108689,3108787-3108933,3109022-3109234,
           3109321-3109938,3110045-3110584,3110941-3111041,
           3111208-3111325,3111450-3111535,3111888-3112002
          Length = 716

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 22/117 (18%), Positives = 49/117 (41%)
 Frame = +3

Query: 276 WYERRLRGAKIMDHFTIKSVPAHIVQSLVKNNLDNNPAVVLNKCIVISKEQYIQLASENL 455
           W + +  G+  +    +K VP +I++ ++  N +N P         ++ +Q IQ+     
Sbjct: 552 WQQDKWNGSLSLKWHIVKDVPNNILKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIFK 611

Query: 456 FYVDRGVLWLSLKLSTNYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDI 626
            +V +  +   L     Y+N+ K  ++   K+          +I K++W  R    +
Sbjct: 612 EHVSKTSI---LDDFAFYENRQKLMQEKRVKQ---------QQIQKQVWDSRAPSSV 656


>03_01_0085 +
           690618-691012,691114-691193,691775-691959,692363-693320,
           693391-693518,693951-694010,694113-694163,694704-694821,
           694990-695915,695916-697707,697810-697943,698029-698526
          Length = 1774

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 537 AVFYVC-ACFYSLCSILKKAKEHLCLRKTSSH*PTVYTVL 421
           AV Y+C  C YSLC +  K  +   +R T     T Y+ +
Sbjct: 169 AVHYMCYTCTYSLCKVCIKQGKFFSVRGTKGFCDTCYSTI 208


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,841,757
Number of Sequences: 37544
Number of extensions: 285991
Number of successful extensions: 568
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)