Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_J02
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like ...    29   4.2  

>Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical
           protein C07A9.3c protein.
          Length = 893

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 504 NYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENI 635
           N KN  +R+K   +KE + +     ++I +K   D+TA D   I
Sbjct: 379 NSKNSLERRKNEASKETIKRLLIDKNQIERKALRDKTAADSPRI 422


>Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical
           protein C07A9.3b protein.
          Length = 965

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 504 NYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENI 635
           N KN  +R+K   +KE + +     ++I +K   D+TA D   I
Sbjct: 446 NSKNSLERRKNEASKETIKRLLIDKNQIERKALRDKTAADSPRI 489


>Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical
           protein C07A9.3a protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 504 NYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENI 635
           N KN  +R+K   +KE + +     ++I +K   D+TA D   I
Sbjct: 446 NSKNSLERRKNEASKETIKRLLIDKNQIERKALRDKTAADSPRI 489


>AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like
           kinase protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 504 NYKNKHKRKKQHNTKEHLHKFAFMTSEIHKKLWADRTADDIENI 635
           N KN  +R+K   +KE + +     ++I +K   D+TA D   I
Sbjct: 446 NSKNSLERRKNEASKETIKRLLIDKNQIERKALRDKTAADSPRI 489


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,440,059
Number of Sequences: 27780
Number of extensions: 317063
Number of successful extensions: 686
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)