Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_I23
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262...    35   0.10 
02_04_0073 - 19471254-19472681                                         30   2.2  
08_02_1585 - 28052927-28053088,28053343-28053579,28053970-280541...    30   2.9  
02_02_0509 - 11064209-11064470,11065945-11066132,11066249-110664...    29   6.7  
06_03_0859 - 25473784-25473798,25473862-25473923,25474251-254743...    28   8.8  
03_02_0700 - 10517754-10519100                                         28   8.8  
01_06_0951 + 33301850-33302175,33302318-33303216,33303327-33303934     28   8.8  

>07_03_1626 +
           28223967-28225294,28225506-28225779,28225939-28226230,
           28226492-28226651,28226809-28226917,28227004-28227099
          Length = 752

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -1

Query: 637 ISEKRVSSRVFWNDLELLAIRDGRVAKLPLCGQTTTLQEASHDRPVHERYPF 482
           I+EK       W DLEL  + D  +   P  G++T L   S  +P    YPF
Sbjct: 433 IAEKGEKGPEMWIDLELKLVADVGIVGAPNAGKSTLLTAISAAKPTIANYPF 484


>02_04_0073 - 19471254-19472681
          Length = 475

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 643 LSNDDPGVEDERWPXSRYCTGCR 711
           + N  PG+ DERWP   +  GC+
Sbjct: 382 MENHHPGLGDERWPFVTHFVGCK 404


>08_02_1585 -
           28052927-28053088,28053343-28053579,28053970-28054176,
           28054797-28054876,28055059-28055137
          Length = 254

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 316 VDSVLGVSGRRALPTSLYSAL-LSRRPQPRSCGAQCARDHPRRYALGLCA 462
           V+ VL +SG +    +    L L+ RPQPR  GA   +     Y   +CA
Sbjct: 137 VEDVLDISGVQTYVINSAKVLFLNERPQPRGAGAAAGKAAASPYNCQICA 186


>02_02_0509 -
           11064209-11064470,11065945-11066132,11066249-11066493,
           11066816-11066987,11067090-11067496,11068443-11068587
          Length = 472

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 81  RCHARGSTESDPEMRPPALRVAHK 10
           RC  R   ES+PEM+   LR+A K
Sbjct: 158 RCQERADAESNPEMKHNLLRLARK 181


>06_03_0859 -
           25473784-25473798,25473862-25473923,25474251-25474345,
           25475718-25475831,25476490-25476695,25476834-25476959,
           25479516-25480178
          Length = 426

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 421 RTERRKIEAEAGGTAARNRERLGVRAA 341
           ++ RR+ EA A   AAR R RLGV  A
Sbjct: 114 KSSRRREEAAAAPEAARGRARLGVSVA 140


>03_02_0700 - 10517754-10519100
          Length = 448

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 643 LSNDDPGVEDERWPXSRYCTGCR 711
           L N  PG+ D RWP   +  GC+
Sbjct: 350 LENYHPGLGDHRWPLVTHFVGCK 372


>01_06_0951 + 33301850-33302175,33302318-33303216,33303327-33303934
          Length = 610

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 702 GMPLQPSCAPRDVXHTVYPXCC 767
           G+ L P C P DV +T+ P  C
Sbjct: 346 GLNLNPMCKPSDVAYTLIPTMC 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,669,538
Number of Sequences: 37544
Number of extensions: 421430
Number of successful extensions: 1457
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)