SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_I23
         (901 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY576779-1|AAT39521.1|  860|Homo sapiens nucleolar protein with ...    32   2.5  
M99063-1|AAA35746.1|  638|Homo sapiens cytokeratin 2 protein.          32   3.3  
D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein.               32   3.3  
AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or...    32   3.3  
AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or...    32   3.3  
AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or...    32   3.3  
AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or...    32   3.3  
AJ564103-1|CAD91891.1|  638|Homo sapiens keratin 2p protein.           32   3.3  
AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.                 32   3.3  
AB209068-1|BAD92305.1|  636|Homo sapiens ash1 (absent, small, or...    32   3.3  
AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein.     32   3.3  
EF119711-1|ABO69251.1| 3327|Homo sapiens beta-xin protein.             31   5.7  
BC018673-1|AAH18673.1|  646|Homo sapiens Unknown (protein for IM...    31   5.7  
AY820969-1|AAV87913.1| 3345|Homo sapiens CMYA3 protein.                31   5.7  
AK074528-1|BAC11041.1|  145|Homo sapiens protein ( Homo sapiens ...    30   10.0 

>AY576779-1|AAT39521.1|  860|Homo sapiens nucleolar protein with
           MIF4G domain 1 protein.
          Length = 860

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = -3

Query: 704 PVQYRXQGQRSSSTPGSSLESRHF*EARKQPRVLE*SGAPCNSGRSRRETSTVRANDHAP 525
           PV +R  G++S        E RH  +AR+  R       P   GRS  E ++    D   
Sbjct: 71  PVSFRPGGRKSRKELRK--EKRHLRKARRLQRTAGPEQGPGLGGRSGAEEASGHRQDTEE 128

Query: 524 RSVPRPARTRAVP 486
           R+ P P+R  + P
Sbjct: 129 RARPAPSRDPSPP 141


>M99063-1|AAA35746.1|  638|Homo sapiens cytokeratin 2 protein.
          Length = 638

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 255 LRTVIATNTNTKCNHATNTSFINYYKLGTDNNRCVALNSVIMRNEQEHFKALLKSK 88
           LRT+     +   +HA++TS +    L  DNNRC+ L S+I     ++ +   +SK
Sbjct: 318 LRTLYEMELSQMQSHASDTSVV----LSMDNNRCLDLGSIIAEVRTQYEEIAQRSK 369


>D87446-1|BAA13387.1| 1805|Homo sapiens KIAA0257 protein.
          Length = 1805

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -2

Query: 390 PAGQQRGIERGWECAPPADTQHTVHATTTPRVASMSTRFYRTR 262
           P GQQ G  + WE  PP +T+  + A+ + R A   T F R +
Sbjct: 179 PTGQQGGTRKLWE-IPPYETKGVMRASFSSREADNHTAFIRIK 220


>AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2964

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 322  CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 194
            C +     S +HV  + P +S + +  + KHKHK + R+  +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260


>AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2969

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 322  CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 194
            C +     S +HV  + P +S + +  + KHKHK + R+  +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260


>AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2964

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 322  CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 194
            C +     S +HV  + P +S + +  + KHKHK + R+  +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260


>AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2969

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 322  CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 194
            C +     S +HV  + P +S + +  + KHKHK + R+  +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260


>AJ564103-1|CAD91891.1|  638|Homo sapiens keratin 2p protein.
          Length = 638

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 255 LRTVIATNTNTKCNHATNTSFINYYKLGTDNNRCVALNSVIMRNEQEHFKALLKSK 88
           LRT+     +   +HA++TS +    L  DNNRC+ L S+I     ++ +   +SK
Sbjct: 318 LRTLYEMELSQMQSHASDTSVV----LSMDNNRCLDLGSIIAEVRAQYEEIAQRSK 369


>AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.
          Length = 2969

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 322  CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 194
            C +     S +HV  + P +S + +  + KHKHK + R+  +L
Sbjct: 1218 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1260


>AB209068-1|BAD92305.1|  636|Homo sapiens ash1 (absent, small, or
           homeotic)-like variant protein.
          Length = 636

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 322 CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 194
           C +     S +HV  + P +S + +  + KHKHK + R+  +L
Sbjct: 509 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 551


>AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein.
          Length = 1349

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 322  CPRDHDAESRQHVDAVLPHSSPLANCHRNKHKHKMQSRDEHFL 194
            C +     S +HV  + P +S + +  + KHKHK + R+  +L
Sbjct: 1222 CGQKKRRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHDYL 1264


>EF119711-1|ABO69251.1| 3327|Homo sapiens beta-xin protein.
          Length = 3327

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -3

Query: 677 RSSSTPGSSLESR-HF*EARKQPRVLE*SGAPCNSGRSRRETSTVRANDHAPRS 519
           +  +TP   +++   + E  K   V+  S   C S   R+ETST R +DH+  S
Sbjct: 160 KEMTTPAKQIKTESEYEETFKPSSVVSTSSTSCVSTSQRKETSTTRYSDHSVTS 213


>BC018673-1|AAH18673.1|  646|Homo sapiens Unknown (protein for
           IMAGE:4290750) protein.
          Length = 646

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -3

Query: 677 RSSSTPGSSLESR-HF*EARKQPRVLE*SGAPCNSGRSRRETSTVRANDHAPRS 519
           +  +TP   +++   + E  K   V+  S   C S   R+ETST R +DH+  S
Sbjct: 96  KEMTTPAKQIKTESEYEETFKPSSVVSTSSTSCVSTSQRKETSTTRYSDHSVTS 149


>AY820969-1|AAV87913.1| 3345|Homo sapiens CMYA3 protein.
          Length = 3345

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -3

Query: 677 RSSSTPGSSLESR-HF*EARKQPRVLE*SGAPCNSGRSRRETSTVRANDHAPRS 519
           +  +TP   +++   + E  K   V+  S   C S   R+ETST R +DH+  S
Sbjct: 207 KEMTTPAKQIKTESEYEETFKPSSVVSTSSTSCVSTSQRKETSTTRYSDHSVTS 260


>AK074528-1|BAC11041.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90047 fis, clone HEMBA1002316. ).
          Length = 145

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 331 PAHCPRDHDAESRQHVDAVLPHSSPLANCHRNKHKH 224
           P   P  H  +   H    +P S+PL N HR  H H
Sbjct: 62  PVSTPSSHPHQ-HHHPTYTIPPSTPLPNLHRRPHSH 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,561,008
Number of Sequences: 237096
Number of extensions: 2118725
Number of successful extensions: 5814
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5811
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -