Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_I23
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024783-1|AAY86294.1|  404|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z79756-4|CAB02116.2|  478|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>AC024783-1|AAY86294.1|  404|Caenorhabditis elegans Hypothetical
           protein Y45G5AL.2 protein.
          Length = 404

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +2

Query: 470 DLQQKWVPLVYGPVVGRFLERGRLPAQWKFRDATVPNCKELQIIPEHAAAYALLRNDGSL 649
           D +  W P  YG +   ++ R ++   W   + T+ +C E+++       YA L ++GS+
Sbjct: 115 DTRLSWDPEDYGGINHIYVPRSKV---W-IPETTIVDCSEIKVFDNEYTRYAWLHSNGSI 170

Query: 650 MM 655
            M
Sbjct: 171 GM 172


>Z79756-4|CAB02116.2|  478|Caenorhabditis elegans Hypothetical
           protein F53C11.7 protein.
          Length = 478

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 210 ATNTSFINYYKLGTDNNRCVALNSVIMRNEQEHFKALLKS 91
           AT+  ++  +++GTDNN C+   S++  N    + A L S
Sbjct: 223 ATSGDYLRLWRIGTDNNACI--ESLLNTNRTAEYCAPLTS 260


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 578 SGRSRRETSTVRANDHAPRSVPRPARTRAVPIFAE 474
           SGRSR+  S  R  +   RS   P+R R  P+  E
Sbjct: 752 SGRSRQSRSFTRTTEFETRSSTLPSRHRTAPVDIE 786


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 578 SGRSRRETSTVRANDHAPRSVPRPARTRAVPIFAE 474
           SGRSR+  S  R  +   RS   P+R R  P+  E
Sbjct: 752 SGRSRQSRSFTRTTEFETRSSTLPSRHRTAPVDIE 786


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,975,361
Number of Sequences: 27780
Number of extensions: 314046
Number of successful extensions: 932
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)