Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_I16
(842 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285... 79 3e-15
05_04_0342 - 20425141-20425311,20425415-20425558,20426506-204266... 79 3e-15
01_06_1593 + 38502884-38502993,38503580-38503665,38504352-385044... 79 6e-15
07_01_0861 + 7152976-7153061,7153222-7153310,7154862-7155013,715... 76 4e-14
02_05_0567 + 30029862-30030136,30030299-30030384,30031663-300318... 72 5e-13
03_06_0443 + 33973229-33973311,33973422-33973510,33974873-339750... 66 3e-11
01_06_1141 + 34845834-34845931,34846110-34846198,34846535-348466... 66 4e-11
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 53 2e-07
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 42 8e-04
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 32 0.66
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133... 29 4.6
03_06_0621 - 35147070-35148359,35148499-35148579,35148665-351487... 28 8.1
02_01_0589 - 4355207-4355410,4355574-4355747,4356234-4356344,435... 28 8.1
>05_05_0237 -
23526613-23527178,23527979-23528066,23528384-23528527,
23528674-23528790,23528860-23528970,23530911-23531062,
23531362-23531450,23531664-23531761
Length = 454
Score = 79.4 bits (187), Expect = 3e-15
Identities = 39/105 (37%), Positives = 62/105 (59%)
Frame = +1
Query: 445 HPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 624
+P FNF+G+LLGP+GN++K+++ T C + + G+GS++D KEE+L+ Y HL D
Sbjct: 148 YPNFNFIGRLLGPRGNSLKRIEASTGCRVFIRGKGSIKDPNKEEQLKGRAG--YEHLDDP 205
Query: 625 LHVEISAIAPPAEAHARIAYALAEVXKILXCPDTNXTVWMSQHXR 759
LH+ I A P AR+A A + ++L D + + Q R
Sbjct: 206 LHILIEAELPANVIDARLAKAQEILEELLKPVDESQDYYKRQQLR 250
>05_04_0342 -
20425141-20425311,20425415-20425558,20426506-20426622,
20426719-20426835,20427533-20427678,20428208-20428293,
20428780-20428889
Length = 296
Score = 79.4 bits (187), Expect = 3e-15
Identities = 37/90 (41%), Positives = 58/90 (64%)
Frame = +1
Query: 442 EHPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLAD 621
++P +NFVG+LLGP+GN++K+++ T C + + GRGS++D KE++LR P Y HL D
Sbjct: 150 KYPNYNFVGRLLGPRGNSLKRVEATTQCRVYIRGRGSVKDSVKEDKLRDK--PGYEHLND 207
Query: 622 DLHVEISAIAPPAEAHARIAYALAEVXKIL 711
LHV + A P R+ A+A + +L
Sbjct: 208 PLHVLVEAEFPSDIVDVRLNQAVAILEDLL 237
>01_06_1593 +
38502884-38502993,38503580-38503665,38504352-38504497,
38504817-38504933,38505028-38505144,38505858-38506001,
38506099-38506251
Length = 290
Score = 78.6 bits (185), Expect = 6e-15
Identities = 38/106 (35%), Positives = 62/106 (58%)
Frame = +1
Query: 442 EHPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLAD 621
++P +NFVG+LLGP+GN++K+++ T C + + GRGS++D KE++LR P Y HL +
Sbjct: 150 KYPNYNFVGRLLGPRGNSLKRVEASTQCRVYIRGRGSVKDSVKEDKLRDK--PGYEHLNE 207
Query: 622 DLHVEISAIAPPAEAHARIAYALAEVXKILXCPDTNXTVWMSQHXR 759
LHV + A P R+ A+ + +L D + + Q R
Sbjct: 208 PLHVLVEAEFPADIIDTRLNQAVTILEDLLKPIDESMDYYKKQQLR 253
>07_01_0861 +
7152976-7153061,7153222-7153310,7154862-7155013,
7155254-7155382,7155465-7155581,7156353-7156496,
7156749-7156851,7157471-7157565,7157953-7158096
Length = 352
Score = 75.8 bits (178), Expect = 4e-14
Identities = 35/89 (39%), Positives = 56/89 (62%)
Frame = +1
Query: 445 HPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 624
+P FNFVG++LGP+GN++K+++ T C + + G+GS++D KEE+L+ P Y HL D
Sbjct: 150 YPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDADKEEKLKGK--PGYEHLNDP 207
Query: 625 LHVEISAIAPPAEAHARIAYALAEVXKIL 711
LH+ I A P R+ A + ++L
Sbjct: 208 LHILIEAELPANIIDTRLRQAQEIMDELL 236
>02_05_0567 +
30029862-30030136,30030299-30030384,30031663-30031811,
30032581-30032685,30032779-30032895,30033251-30033394,
30033519-30033668
Length = 341
Score = 72.1 bits (169), Expect = 5e-13
Identities = 35/106 (33%), Positives = 60/106 (56%)
Frame = +1
Query: 442 EHPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLAD 621
++P FNFVG++LGP+GN++K+++ T C + + GRGS++D +E+ +R P Y HL +
Sbjct: 202 KYPTFNFVGRILGPRGNSLKRVEATTDCRVLIRGRGSIKDPAREDMMRGK--PGYEHLNE 259
Query: 622 DLHVEISAIAPPAEAHARIAYALAEVXKILXCPDTNXTVWMSQHXR 759
LH+ + A P R+ A + +L D + + Q R
Sbjct: 260 PLHILVEAELPVEIIDTRLIQARDILEDLLKPVDESQDFFKKQQLR 305
>03_06_0443 +
33973229-33973311,33973422-33973510,33974873-33975024,
33975463-33975579,33975729-33975776,33976169-33976312,
33976715-33976858
Length = 258
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 16/121 (13%)
Frame = +1
Query: 445 HPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQK----------------EE 576
H +FNFVG++LGP+GN++K+++ T C + + G+GS++D K E+
Sbjct: 106 HQEFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKVCKIWVKLLLVALLISED 165
Query: 577 ELRQSLDPKYSHLADDLHVEISAIAPPAEAHARIAYALAEVXKILXCPDTNXTVWMSQHX 756
+LR P Y HL+D LH+ I A P + AR+ +A + ++L D + + Q
Sbjct: 166 KLRGK--PGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQL 223
Query: 757 R 759
R
Sbjct: 224 R 224
>01_06_1141 +
34845834-34845931,34846110-34846198,34846535-34846686,
34847473-34847583,34847702-34847818,34847989-34848156,
34848563-34848703
Length = 291
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Frame = +1
Query: 445 HPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRD--------RQKEEELRQSLDP 600
+P FNF+G+LLGP+GN++K+++ T C + + G+GS++D KEE+L+ P
Sbjct: 148 YPHFNFIGRLLGPRGNSLKRVEASTGCRVFIRGKGSIKDPIKASLFVTFKEEQLKGR--P 205
Query: 601 KYSHLADDLHVEISAIAPPAEAHARIAYA 687
Y HL+D H+ I A P R+A A
Sbjct: 206 GYEHLSDPTHILIEAELPADVIDTRLAQA 234
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/68 (32%), Positives = 45/68 (66%)
Frame = +1
Query: 442 EHPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLAD 621
E P +NF+G ++GP+GNT K+++++T ++ + G+GS+++ + ++ DP + +
Sbjct: 105 EFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGKLLQKRDMKPDPSEN---E 161
Query: 622 DLHVEISA 645
DLHV + A
Sbjct: 162 DLHVLVEA 169
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 41.5 bits (93), Expect = 8e-04
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = +1
Query: 445 HPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 624
+P N +G L+GP+ N K+LQE+T ++ V G R ++ E+ Q+ + +D
Sbjct: 180 YPGHNIIGVLMGPESNAQKRLQEETGAKIRVY--GIKRTNGEKSEIHQADIGEVQGAYED 237
Query: 625 LHVEISA 645
L++ +SA
Sbjct: 238 LYINVSA 244
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 463 VGKLLGPKGNTMKQLQEDTLCEMAVL 540
VG ++G GN +K +Q DT CE+ VL
Sbjct: 425 VGGIIGKGGNNIKSIQNDTGCEIKVL 450
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 463 VGKLLGPKGNTMKQLQEDTLCEMAV 537
VG LLG G+ +KQ+ D+ CE+ V
Sbjct: 286 VGWLLGKNGSVIKQMSTDSCCEIRV 310
>02_01_0198 +
1334563-1334994,1335872-1335919,1336096-1336351,
1336733-1336881,1336969-1337097,1337425-1337592,
1338416-1338610
Length = 458
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 463 VGKLLGPKGNTMKQLQEDTLCEMAVL 540
VG L+G +G+T+K+L EDT + VL
Sbjct: 108 VGGLIGRRGDTIKRLCEDTRARVRVL 133
>03_06_0621 - 35147070-35148359,35148499-35148579,35148665-35148741,
35148792-35149298,35149405-35150278
Length = 942
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 469 KLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKY--SHLADDLHVEIS 642
K G K MK+++ A R D Q+ E++ L PKY + L +VE+
Sbjct: 855 KTKGAKRPKMKEVEIRLQLLRAARSRAYKEDLQRSSEIKPLLTPKYKCTSLNSTKNVEMG 914
Query: 643 AIAPP 657
+A P
Sbjct: 915 LVANP 919
>02_01_0589 -
4355207-4355410,4355574-4355747,4356234-4356344,
4356506-4356712,4357609-4357716,4358442-4358698,
4359120-4359241,4359782-4360001,4360877-4361130,
4361782-4362015,4362143-4362189
Length = 645
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Frame = -1
Query: 605 YLGSNDWRSSSSFCLSLIEPLPSTAISHSVSSC------NCFIVFPFGPNSFPTKLNLGC 444
YLG ND F +++ + S + + SC N F++ PF P +F L + C
Sbjct: 291 YLGKNDQAPDFVFLAHVVDIMASMHVPFVLRSCSSTPFANHFVLLPFWPVAFGFMLLMWC 350
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,570,924
Number of Sequences: 37544
Number of extensions: 329725
Number of successful extensions: 786
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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