Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_I16
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 96 3e-20
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 95 4e-20
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 95 4e-20
AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna bin... 95 7e-20
AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna bin... 95 7e-20
Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical pr... 86 3e-17
U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein. 86 3e-17
U10438-13|ABB88243.1| 235|Caenorhabditis elegans Hypothetical p... 60 3e-09
AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical... 58 8e-09
AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z99281-18|CAD56258.1| 380|Caenorhabditis elegans Hypothetical p... 48 8e-06
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 48 8e-06
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 48 8e-06
Z77132-1|CAB00859.1| 278|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 36 0.027
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 31 1.4
U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 30 2.4
AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 30 2.4
AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 2.4
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 29 4.1
Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical pr... 28 9.5
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 95.9 bits (228), Expect = 3e-20
Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Frame = +1
Query: 148 GYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKL 321
G +SG + T + NG + + + EY+ +LL +K +L + F +L
Sbjct: 37 GPSSGPPQVTITPSGVQSGSANGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERL 96
Query: 322 IDQEVTKVQA---SGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGN 492
D+E+ KV+ +K+S + EHP +NFVG++LGP+G
Sbjct: 97 ADEEINKVRVVLFQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGM 156
Query: 493 TMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLHVEISAIAPPAEAHA 672
T KQL+++T C++ V GRGSMRD++KEE R P + HL+++LHV I A
Sbjct: 157 TAKQLEQETGCKIMVRGRGSMRDKKKEELNRGK--PNWEHLSEELHVLIQCEDTENRAKV 214
Query: 673 RIAYALAEVXKIL 711
++ A+ EV K+L
Sbjct: 215 KLMRAVEEVRKLL 227
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/89 (46%), Positives = 62/89 (69%)
Frame = +1
Query: 445 HPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 624
HP FNF+GK+LGPKG T++ L + C + +LGRGS +DR+KE EL S DP+++H +
Sbjct: 140 HPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDPQHAHFSGP 199
Query: 625 LHVEISAIAPPAEAHARIAYALAEVXKIL 711
LHV++ +AP A+ R+A + E+ +IL
Sbjct: 200 LHVKVETVAPAYIAYGRVAAVIEELSRIL 228
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/89 (46%), Positives = 62/89 (69%)
Frame = +1
Query: 445 HPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADD 624
HP FNF+GK+LGPKG T++ L + C + +LGRGS +DR+KE EL S DP+++H +
Sbjct: 140 HPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDPQHAHFSGP 199
Query: 625 LHVEISAIAPPAEAHARIAYALAEVXKIL 711
LHV++ +AP A+ R+A + E+ +IL
Sbjct: 200 LHVKVETVAPAYIAYGRVAAVIEELSRIL 228
>AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform a protein.
Length = 328
Score = 94.7 bits (225), Expect = 7e-20
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Frame = +1
Query: 211 NGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA---SGRITKDS 375
NG + + + EY+ +LL +K +L + F +L D+E+ KV+ +K+S
Sbjct: 16 NGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVLFQCEFSKES 75
Query: 376 KYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSM 555
+ EHP +NFVG++LGP+G T KQL+++T C++ V GRGSM
Sbjct: 76 APLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSM 135
Query: 556 RDRQKEEELRQSLDPKYSHLADDLHVEISAIAPPAEAHARIAYALAEVXKIL 711
RD++KEE R P + HL+++LHV I A ++ A+ EV K+L
Sbjct: 136 RDKKKEELNRGK--PNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL 185
>AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform b protein.
Length = 403
Score = 94.7 bits (225), Expect = 7e-20
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Frame = +1
Query: 211 NGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA---SGRITKDS 375
NG + + + EY+ +LL +K +L + F +L D+E+ KV+ +K+S
Sbjct: 16 NGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVLFQCEFSKES 75
Query: 376 KYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSM 555
+ EHP +NFVG++LGP+G T KQL+++T C++ V GRGSM
Sbjct: 76 APLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSM 135
Query: 556 RDRQKEEELRQSLDPKYSHLADDLHVEISAIAPPAEAHARIAYALAEVXKIL 711
RD++KEE R P + HL+++LHV I A ++ A+ EV K+L
Sbjct: 136 RDKKKEELNRGK--PNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLL 185
>Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical
protein T23G11.3 protein.
Length = 463
Score = 85.8 bits (203), Expect = 3e-17
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Frame = +1
Query: 238 EKAGEYMRELLSEK--IKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKY-VDVFRDXXX 408
E EY+ +L+ EK + L F +L+D E+ +V+ + T+ + +
Sbjct: 144 EATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTEFPRVELPEPAGDMI 203
Query: 409 XXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQ 588
E+P +NFVG++LGP+G T KQL++DT C++ V G+GSMRD+ KE R
Sbjct: 204 SITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRG 263
Query: 589 SLDPKYSHLADDLHVEISAIAPPAEAHARIAYALAEVXKIL 711
+ + HL DDLHV + H ++ AL +V K+L
Sbjct: 264 KAN--WEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLL 302
>U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein.
Length = 463
Score = 85.8 bits (203), Expect = 3e-17
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Frame = +1
Query: 238 EKAGEYMRELLSEK--IKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKY-VDVFRDXXX 408
E EY+ +L+ EK + L F +L+D E+ +V+ + T+ + +
Sbjct: 144 EATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTEFPRVELPEPAGDMI 203
Query: 409 XXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQ 588
E+P +NFVG++LGP+G T KQL++DT C++ V G+GSMRD+ KE R
Sbjct: 204 SITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRG 263
Query: 589 SLDPKYSHLADDLHVEISAIAPPAEAHARIAYALAEVXKIL 711
+ + HL DDLHV + H ++ AL +V K+L
Sbjct: 264 KAN--WEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLL 302
>U10438-13|ABB88243.1| 235|Caenorhabditis elegans Hypothetical
protein B0280.17 protein.
Length = 235
Score = 59.7 bits (138), Expect = 3e-09
Identities = 28/70 (40%), Positives = 46/70 (65%)
Frame = +1
Query: 457 NFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLHVE 636
N VG+L+GP+G T++QL++D C++ + G+G +D KEE LR+ + + HL + +HV
Sbjct: 129 NPVGRLIGPRGMTIRQLEKDLGCKLFIRGKGCTKDDAKEERLRERVG--WEHLKEPIHVM 186
Query: 637 ISAIAPPAEA 666
IS + EA
Sbjct: 187 ISVRSDSEEA 196
>AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32a protein.
Length = 384
Score = 58.0 bits (134), Expect = 8e-09
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Frame = +1
Query: 442 EHPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSL----DPKYS 609
++PK+NFVG++LGP+G T+KQL+++T C + V GR S E + +S P S
Sbjct: 81 KYPKYNFVGRILGPRGMTVKQLEKETGCRIFVRGRASTTASNPESKPNKSTPSFSKPSLS 140
Query: 610 HLA------DDLHVEISAIAPPAEAHARIAYALAEVXKILXCP 720
++ + LHV I + A A++A+A+ + ++L P
Sbjct: 141 IISRNALTEEPLHVYIECQDTQSAAQAKMAHAVEVIQRLLSPP 183
>AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical
protein K07H8.9 protein.
Length = 254
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 445 HPKFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSL-DPKYSHLAD 621
+P +NF+G+++GP+G T KQL++DT C + + RG+ ++ L ++ D +
Sbjct: 132 YPTYNFIGRIIGPRGTTAKQLEKDTGCRIMI--RGNHSNKMYGNALHKTHGDGSQDAIDL 189
Query: 622 DLHVEISAIAPPAEAHARIAYALAEVXKILXCP 720
L V + P EA ARI AL V +L P
Sbjct: 190 PLRVIVETSGPRREATARITAALETVQVLLVPP 222
>Z99281-18|CAD56258.1| 380|Caenorhabditis elegans Hypothetical
protein Y57G11C.36 protein.
Length = 380
Score = 48.0 bits (109), Expect = 8e-06
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Frame = +1
Query: 115 LIKMADKYDKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKL-- 288
L+++A+K+ + + ++ + + + +E K Y+ L EK +L
Sbjct: 14 LLRLAEKHQHSSLLTPPPSDDSQKSLKSTSNHSDQEMSKNLHDVEAYIDALKGEKHQLAQ 73
Query: 289 -NNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNFV 465
++ F LID+E+ KV + S+ + P +NFV
Sbjct: 74 YSSGGFNHVFNLIDKEIQKVGGNDAHDGGSQ----MSGDGSMLTETIMVPVEKFPDYNFV 129
Query: 466 GKLLGPKGNTMKQLQEDTLCEMAVLGR 546
G+LLGP+G T KQL+ T C + +LGR
Sbjct: 130 GRLLGPRGTTAKQLEVTTGCRITILGR 156
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/93 (27%), Positives = 46/93 (49%)
Frame = +1
Query: 283 KLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 462
+LN + +L K+QA +I + K +R + P NF
Sbjct: 260 RLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPNIRLHDKVWIPQEQFPDLNF 319
Query: 463 VGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRD 561
VG L+GP+GNT+K L+ +T ++ + G+GS+++
Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/93 (27%), Positives = 46/93 (49%)
Frame = +1
Query: 283 KLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 462
+LN + +L K+QA +I + K +R + P NF
Sbjct: 260 RLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPNIRLHDKVWIPQEQFPDLNF 319
Query: 463 VGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRD 561
VG L+GP+GNT+K L+ +T ++ + G+GS+++
Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352
>Z77132-1|CAB00859.1| 278|Caenorhabditis elegans Hypothetical
protein F54D1.1 protein.
Length = 278
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/65 (29%), Positives = 38/65 (58%)
Frame = +1
Query: 451 KFNFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLH 630
K N++G++LGP G + + ++ + + G GS+R++ +E +R+ + HL + LH
Sbjct: 151 KCNYIGRILGPSGMSARMIENQYDVTLLIRGAGSVRNKAMDERVRK----RNEHLEEPLH 206
Query: 631 VEISA 645
V + A
Sbjct: 207 VLLIA 211
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 457 NFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLHVE 636
N G ++G G+T++QLQE + C+M +L + + + + LR + DP+ LA L E
Sbjct: 101 NRCGLIIGKSGDTIRQLQEKSGCKM-ILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAE 159
Query: 637 I 639
I
Sbjct: 160 I 160
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 457 NFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLHVE 636
N G ++G G+T++QLQE + C+M +L + + + + LR + DP+ LA L E
Sbjct: 164 NRCGLIIGKSGDTIRQLQEKSGCKM-ILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAE 222
Query: 637 I 639
I
Sbjct: 223 I 223
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 457 NFVGKLLGPKGNTMKQLQEDTLCEMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLHVE 636
N G ++G G+T++QLQE + C+M +L + + + + LR + DP+ LA L E
Sbjct: 142 NRCGLIIGKSGDTIRQLQEKSGCKM-ILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAE 200
Query: 637 I 639
I
Sbjct: 201 I 201
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 557 LIEPLPSTAISHSVSSCNCFIVFPF 483
L+EP+ I+H V CNC++ PF
Sbjct: 746 LLEPIYRAYINHFVDECNCYLKGPF 770
>U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein.
Length = 415
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1
Query: 463 VGKLLGPKGNTMKQLQEDT 519
VG ++GPKG T+K++Q+DT
Sbjct: 148 VGLVVGPKGATIKRIQQDT 166
>AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess
protein 3, isoform a protein.
Length = 415
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1
Query: 463 VGKLLGPKGNTMKQLQEDT 519
VG ++GPKG T+K++Q+DT
Sbjct: 148 VGLVVGPKGATIKRIQQDT 166
>AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess
protein 3, isoform b protein.
Length = 443
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1
Query: 463 VGKLLGPKGNTMKQLQEDT 519
VG ++GPKG T+K++Q+DT
Sbjct: 176 VGLVVGPKGATIKRIQQDT 194
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 178 TTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQAS 354
TTQ P+E D+ + K+ EKA E+ E KL L +L + + T + S
Sbjct: 4 TTQQTPKEADKKKADDKKVPEKAEPKKEEMSEEDQKLEEDLNLLVQRLSEPDTTLYKPS 62
>Z68751-4|CAA92974.1| 425|Caenorhabditis elegans Hypothetical
protein T05E11.4 protein.
Length = 425
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +1
Query: 577 ELRQSLDPKYSHLADDLHVEISAIAPPAEAHARIAYALAEVXKILXCPDTNXTVWMSQHX 756
E +QS S +DD ++ I P +A +I +ALA++ + + + + T+ +S
Sbjct: 18 ESQQSTIYSDSDDSDDSFLDDEVIPPKEQAMRKIEFALADIKRQMDNKEKSLTLRISTSK 77
Query: 757 RYRCQR 774
+ C R
Sbjct: 78 SHFCLR 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,681,347
Number of Sequences: 27780
Number of extensions: 323237
Number of successful extensions: 932
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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