Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_I15
         (839 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81449-7|CAE17762.1|  121|Caenorhabditis elegans Hypothetical pr...   116   2e-26
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    31   1.3  
EF090262-1|ABK78775.1|  120|Caenorhabditis elegans glycoprotein ...    30   1.8  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   5.4  
AF067608-6|AAC17648.2|  194|Caenorhabditis elegans Hypothetical ...    28   7.2  

>Z81449-7|CAE17762.1|  121|Caenorhabditis elegans Hypothetical
           protein C46F11.6 protein.
          Length = 121

 Score =  116 bits (279), Expect = 2e-26
 Identities = 60/106 (56%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
 Frame = +3

Query: 279 MSAK---NIPGDKINLRLILVSGKTKEFVFSPVDSAGDIALHVYDNWPEADWATECVSRA 449
           MSAK   +   +++ LRLILVSGKT EF F P+ SA D+   V+D WP+ +W  + V  A
Sbjct: 1   MSAKQSIDSQAERVVLRLILVSGKTHEFEFHPLTSAHDVTQMVFDQWPD-EWYEDKVQSA 59

Query: 450 EILRLIYQGRFLHSSVTLGALGLPLGRTTVMHLVPREHLPEPNSHD 587
           ++L+LIY GRFLH SVTL AL L  G+TTVMHLV RE+LPEPNS +
Sbjct: 60  QMLKLIYHGRFLHGSVTLHALQLMPGKTTVMHLVTRENLPEPNSSE 105


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 277 QCRQKIYPEIRSTYD*SWFPERRKSSSSVPSTRPATSHCTST 402
           Q  +  YP + ST++   +P+  +  +S PST  +T+  T+T
Sbjct: 178 QSPKPTYPSVPSTFEFEKYPKSTEEPTSTPSTSTSTTTTTTT 219


>EF090262-1|ABK78775.1|  120|Caenorhabditis elegans glycoprotein
           hormone alpha 2 protein.
          Length = 120

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 25/83 (30%), Positives = 36/83 (43%)
 Frame = +1

Query: 34  CEKLLVLMNINGKSC*LRLQTMGRLLCLCF*YIFRAVMMAK*FGRVKCLCRMLGSHGCSE 213
           C+K+ V   IN K C L +  + R    CF + F   +  K     KC CRM+      E
Sbjct: 36  CKKVGVEELINEKGCDLMIIRINRCRGHCFSFTFPNPLTKKYSVHAKC-CRMVE----WE 90

Query: 214 ILSLDKSCATRRRITEKEADTQC 282
           +L  +  C+   R     + TQC
Sbjct: 91  MLETELKCSKGNRNLRIPSATQC 113


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 334  PERRKSSSSVPSTRPATSHCTSTIIGPKLTG 426
            P+   SS+SVPS+  ATS  +ST +G    G
Sbjct: 1508 PQPTVSSTSVPSSTGATSSGSSTTVGSSTVG 1538


>AF067608-6|AAC17648.2|  194|Caenorhabditis elegans Hypothetical
           protein B0511.9a protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 376 PATSHCTSTIIGPKLTGQRNACLAP 450
           P+T  CT T I P LT  R    AP
Sbjct: 76  PSTGECTRTSIAPTLTSARTPVAAP 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,708,981
Number of Sequences: 27780
Number of extensions: 371827
Number of successful extensions: 1155
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)