Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_I14
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 91 7e-19
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 47 2e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 47 2e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 47 2e-05
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 47 2e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 44 2e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 43 3e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 42 4e-04
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 42 4e-04
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 42 4e-04
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 6e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 42 8e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 42 8e-04
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 42 8e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 39 0.004
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 39 0.004
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 39 0.005
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 39 0.005
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 39 0.005
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 38 0.007
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 38 0.007
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 38 0.007
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 38 0.007
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 38 0.007
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 37 0.017
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 36 0.029
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 36 0.029
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 36 0.029
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.038
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.038
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.051
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.051
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.051
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 35 0.067
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 34 0.12
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 34 0.12
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 34 0.12
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 34 0.12
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 34 0.12
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 34 0.15
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 34 0.15
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.15
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 34 0.15
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 33 0.20
Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 33 0.27
X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 33 0.27
X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 33 0.27
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 33 0.36
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 32 0.47
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 32 0.47
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 32 0.47
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 32 0.47
AC024875-4|AAK29990.1| 143|Caenorhabditis elegans U2af splicing... 32 0.47
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 32 0.47
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 32 0.47
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 32 0.47
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 31 0.83
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 31 0.83
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 31 0.83
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 31 1.4
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical p... 30 2.5
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 30 2.5
Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 29 3.3
Z82060-3|CAB04883.1| 206|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 28 7.7
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 28 7.7
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 28 7.7
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 28 7.7
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 91.5 bits (217), Expect = 7e-19
Identities = 37/72 (51%), Positives = 52/72 (72%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+ I L+ NV + H+ EIFS YG +K+++ P DR H H RGY YVE++N ++AE ++K
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 606 HMDGGQIDGQEI 641
HMDGGQIDG +
Sbjct: 194 HMDGGQIDGMAV 205
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T + I L+ T + + F YG + + P D+ + +G+ +V F +AE+A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDK-YSRQSKGFGFVRFYERRDAEHAL 77
Query: 603 KHMDGGQIDGQEI 641
DG +DG+E+
Sbjct: 78 DRTDGKLVDGREL 90
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T + I L+ T + + F YG + + P D+ + +G+ +V F +AE+A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDK-YSRQSKGFGFVRFYERRDAEHAL 77
Query: 603 KHMDGGQIDGQEI 641
DG +DG+E+
Sbjct: 78 DRTDGKLVDGREL 90
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
++++G L +V + +IF YG +K ++ R G +A+VEF + +AE+A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR-----GPAFAFVEFEDHRDAEDAVR 64
Query: 606 HMDGGQIDGQEI 641
DG + DG+ I
Sbjct: 65 ARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
++++G L +V + +IF YG +K ++ R G +A+VEF + +AE+A++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR-----GPAFAFVEFEDHRDAEDAVR 64
Query: 606 HMDGGQIDGQEI 641
DG + DG+ I
Sbjct: 65 ARDGYEFDGRRI 76
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ +G ++ +V+ D I IFS G V SI+ DR +GY ++EF + AE A+++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDR-ETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 609 MDGGQIDGQ 635
++G ++ G+
Sbjct: 79 LNGYELSGR 87
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+++G T + + FS+ G + ++ DR RG+A++EF A+ A++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDR-ETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 609 MDGGQIDGQEI 641
M+G + +G+ +
Sbjct: 66 MNGAEFNGRPL 76
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ +GR+ + + F YG +K + D RGYA++E+++ E A K
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAG--KPRGYAFIEYSDKAEMHTAYKK 163
Query: 609 MDGGQIDGQEI 641
DG ++DG+ +
Sbjct: 164 ADGIKVDGKRL 174
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+++G T +VT + F +G V +I PMD RG+ +VEF+ A++A A+ +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMD-YESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 609 MDGGQIDGQEI 641
M+ ++ G+ I
Sbjct: 72 MNESELFGKTI 82
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/73 (26%), Positives = 39/73 (53%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
+RI++G ++ + D + F +G +KSI D H+ + +A+VE+ + A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHH-KTFAFVEYEVPEAALLAQ 160
Query: 603 KHMDGGQIDGQEI 641
+ M+G + G+ +
Sbjct: 161 ESMNGQMLGGRNL 173
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNNADEAENAM 602
R+++ + +++ + +F +G + ++ + R G RG+ Y+EFNN A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEI--VKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 603 KHMDGGQIDGQ 635
M+ + GQ
Sbjct: 266 AGMNMFDLGGQ 276
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/73 (26%), Positives = 39/73 (53%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
+RI++G ++ + D + F +G +KSI D H+ + +A+VE+ + A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHH-KTFAFVEYEVPEAALLAQ 160
Query: 603 KHMDGGQIDGQEI 641
+ M+G + G+ +
Sbjct: 161 ESMNGQMLGGRNL 173
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNNADEAENAM 602
R+++ + +++ + +F +G + ++ + R G RG+ Y+EFNN A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEI--VKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 603 KHMDGGQIDGQEITAAPVLVP 665
M+ + GQ + + P
Sbjct: 266 AGMNMFDLGGQYLRVGKCVTP 286
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/73 (26%), Positives = 39/73 (53%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
+RI++G ++ + D + F +G +KSI D H+ + +A+VE+ + A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHH-KTFAFVEYEVPEAALLAQ 160
Query: 603 KHMDGGQIDGQEI 641
+ M+G + G+ +
Sbjct: 161 ESMNGQMLGGRNL 173
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNNADEAENAM 602
R+++ + +++ + +F +G + ++ + R G RG+ Y+EFNN A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEI--VKCQLARAPTGRGHRGFGYLEFNNLTSQSEAI 265
Query: 603 KHMDGGQIDGQEITAAPVLVP 665
M+ + GQ + + P
Sbjct: 266 AGMNMFDLGGQYLRVGKCVTP 286
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
RI+IGRLT V+ I F YG ++ + G+ +VEF++ +AE+A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---------NGFGFVEFDDKRDAEDAVH 54
Query: 606 HMDGGQIDGQEI 641
++G ++ G+ +
Sbjct: 55 DLNGKELGGERV 66
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
RI+IGRLT V+ I F YG ++ + G+ +VEF++ +AE+A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---------NGFGFVEFDDKRDAEDAVH 54
Query: 606 HMDGGQIDGQEI 641
++G ++ G+ +
Sbjct: 55 DLNGKELGGERV 66
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
RI+IGRLT V+ I F YG ++ + G+ +VEF++ +AE+A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---------NGFGFVEFDDKRDAEDAVH 54
Query: 606 HMDGGQIDGQEI 641
++G ++ G+ +
Sbjct: 55 DLNGKELGGERV 66
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 459 TRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKHMDGGQIDGQE 638
T D +H+ FS YG +K+I +DR +GYA VE+ EA A+ + + GQ
Sbjct: 67 TEDDVHDKFSEYGKIKNIHLNLDR-RTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQN 125
Query: 639 I 641
+
Sbjct: 126 V 126
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/69 (28%), Positives = 42/69 (60%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
++++G L + T + EIF +G ++ + + R P G+A+VE+++ +AE+A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPP----GFAFVEYDDVRDAEDAVR 57
Query: 606 HMDGGQIDG 632
+DG +I G
Sbjct: 58 ALDGSRICG 66
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/69 (28%), Positives = 42/69 (60%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
++++G L + T + EIF +G ++ + + R P G+A+VE+++ +AE+A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPP----GFAFVEYDDVRDAEDAVR 57
Query: 606 HMDGGQIDG 632
+DG +I G
Sbjct: 58 ALDGSRICG 66
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/69 (28%), Positives = 42/69 (60%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
++++G L + T + EIF +G ++ + + R P G+A+VE+++ +AE+A++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVW--VARRPP----GFAFVEYDDVRDAEDAVR 57
Query: 606 HMDGGQIDG 632
+DG +I G
Sbjct: 58 ALDGSRICG 66
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENA 599
T++ + L + + +F T+G VK+I P RG+ +V+F +ADEA A
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+ + L D + +F YG V ++ +D+ +G+A VEF + A A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDK-KTGACKGFAIVEFVFPEAAVAAYS 338
Query: 606 HMDGGQIDGQEITAAP 653
+DG G+ + P
Sbjct: 339 ALDGYVFKGRMMHILP 354
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 552 GYAYVEFNNADEAENAMKHMDGGQIDGQEI 641
G+ +V+F A +A+ A+K M G +DG +
Sbjct: 690 GFGFVQFYTAFDAKTALKDMQGELLDGHSL 719
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+++G + T + I + F G+V + DR H +G+AYVEF + +NA+
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHP-KGFAYVEFTEKEGMQNALA- 137
Query: 609 MDGGQIDGQEITAAP 653
M + G++I P
Sbjct: 138 MTDSLLRGRQIKVDP 152
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+++G T D + FS G V ++ DR RG+A+VEF A+ A+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDR-ETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 609 MDGGQIDGQEI 641
+G +G+ +
Sbjct: 65 FNGVDFNGRAL 75
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/73 (24%), Positives = 40/73 (54%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+++G L+ D ++E+F G V+ + +DR G+ +VE+ ++AE A+++
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRF-KKTPCGFCFVEYYTREDAELALQN 97
Query: 609 MDGGQIDGQEITA 647
+ ++D + I A
Sbjct: 98 ISNTRMDDRVIRA 110
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ + +L T + + IFS +G + + E DR + YA++EF+NA E A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR-RSGDSLQYAFIEFDNAKSCEQAFFK 301
Query: 609 MDGGQIDGQEI 641
MD ID + I
Sbjct: 302 MDNVLIDDRRI 312
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+++G + T + I F+ G V ++ DR RG+A+VEF+ A+ A++
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDR-ETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 609 MDGGQIDGQEI 641
++G +G+ +
Sbjct: 67 LNGVAFNGRNL 77
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ + +L T + + IFS +G + + E DR + YA++EF+NA E A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR-RSGDSLQYAFIEFDNAKSCEQAFFK 301
Query: 609 MDGGQIDGQEI 641
MD ID + I
Sbjct: 302 MDNVLIDDRRI 312
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ + +L T + + IFS +G + + E DR + YA++EF+NA E A
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDR-RSGDSLQYAFIEFDNAKSCEQAFFK 232
Query: 609 MDGGQIDGQEI 641
MD ID + I
Sbjct: 233 MDNVLIDDRRI 243
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/71 (23%), Positives = 38/71 (53%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T + + L + I +IF ++G ++ I+ +D RG+A + F NAD+A+ +
Sbjct: 127 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS--NRENRGFATITFRNADDAQKSC 184
Query: 603 KHMDGGQIDGQ 635
+ ++ ++ G+
Sbjct: 185 EQLNNFELAGR 195
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/71 (23%), Positives = 38/71 (53%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T + + L + I +IF ++G ++ I+ +D RG+A + F NAD+A+ +
Sbjct: 272 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS--NRENRGFATITFRNADDAQKSC 329
Query: 603 KHMDGGQIDGQ 635
+ ++ ++ G+
Sbjct: 330 EQLNNFELAGR 340
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
+I +G LT N T D + E +S +G + I D + RG+ +V F+ E + AMK
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRS-RGFGFVTFSGKTEVDAAMK 82
Query: 606 H----MDGGQID 629
+DG +D
Sbjct: 83 QRPHIIDGKTVD 94
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
+I +G LT N T D + E +S +G + I D + RG+ +V F+ E + AMK
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRS-RGFGFVTFSGKTEVDAAMK 82
Query: 606 H----MDGGQID 629
+DG +D
Sbjct: 83 QRPHIIDGKTVD 94
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
+I +G LT N T D + E +S +G + I D + RG+ +V F+ E + AMK
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRS-RGFGFVTFSGKTEVDAAMK 82
Query: 606 H----MDGGQID 629
+DG +D
Sbjct: 83 QRPHIIDGKTVD 94
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ +G L+ +V+ + + F+ +G V + D + +GY +V F N AENA+
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRD-VQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 609 MDG 617
M+G
Sbjct: 196 MNG 198
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T +++G ++ T + ++FSTYG + + + YA+V + + A A+
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRI-------FKTQRYAFVRYEKKECATKAI 289
Query: 603 KHMDGGQIDGQEI 641
M+G ++ G ++
Sbjct: 290 MEMNGKEMAGNQV 302
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAENA 599
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 128 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 178
Query: 600 MKHMDGGQIDGQ 635
+ M+ + GQ
Sbjct: 179 IVQMNNQDVGGQ 190
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ +G L+ V + E F +G V + D + +GY +V + +EAE A++
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 609 MDG 617
M+G
Sbjct: 83 MNG 85
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAENA 599
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 138 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 188
Query: 600 MKHMDGGQIDGQ 635
+ M+ + GQ
Sbjct: 189 IVQMNNQDVGGQ 200
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ +G L+ V + E F +G V + D + +GY +V + +EAE A++
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 609 MDG 617
M+G
Sbjct: 93 MNG 95
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAENA 599
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 241 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 291
Query: 600 MKHMDGGQIDGQ 635
+ M+ + GQ
Sbjct: 292 IVQMNNQDVGGQ 303
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ +G L+ V + E F +G V + D + +GY +V + +EAE A++
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 195
Query: 609 MDG 617
M+G
Sbjct: 196 MNG 198
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+++G L VT D I +F+ G+V + D + YA+VEF++ +A A++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDG----SNDPYAFVEFSDHGQASQALQT 103
Query: 609 MD 614
M+
Sbjct: 104 MN 105
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMDRLHPHNGRGYAYVEFNNADEAENA 599
T +++G + ++T D I + F+++G + + F M +GYA+V+F+N D A A
Sbjct: 209 TSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFKM--------QGYAFVKFDNKDAAAKA 259
Query: 600 MKHMDGGQIDGQ 635
+ M+ + GQ
Sbjct: 260 IVQMNNQDVGGQ 271
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ +G L+ V + E F +G V + D + +GY +V + +EAE A++
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDT-NTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 609 MDG 617
M+G
Sbjct: 164 MNG 166
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
I + L N T IHE F+ T++ ++F P+ G AYVEF N +EA AM++
Sbjct: 66 IRLRGLPFNATEKDIHEFFAGL-TIERVKFVCTTGRPN---GEAYVEFKNTEEAGKAMEN 121
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T ++I L N D + E+ S YG + S + MD+ +N +GY +V+F + A A+
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKA-TNNCKGYGFVDFESPQAAAAAV 165
Query: 603 KHMDGGQIDGQ 635
++ + Q
Sbjct: 166 DGLNTEGVQAQ 176
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T ++I L N D + E+ S YG + S + MD+ +N +GY +V+F + A A+
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKA-TNNCKGYGFVDFESPQAAAAAV 139
Query: 603 KHMDGGQIDGQ 635
++ + Q
Sbjct: 140 DGLNTEGVQAQ 150
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
+ IG + N T + I E F G + P D+ + +AY+EF+++ ENA+
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQ-KNFAYIEFDDSSSIENAL 113
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.029
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ +G L + + E F +G V + D + + G+GY +V + ++AE A+
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDN-NTNKGKGYGFVSYPRREDAERAIDE 192
Query: 609 MDGGQIDGQEI 641
M+G + + I
Sbjct: 193 MNGAWLGRRTI 203
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/74 (21%), Positives = 38/74 (51%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
I +G L V +++ FS +G + + M + +G+A++ F + + ++ A++
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 609 MDGGQIDGQEITAA 650
M+G + + IT +
Sbjct: 162 MNGQFLCNRAITVS 175
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/74 (21%), Positives = 38/74 (51%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
I +G L V +++ FS +G + + M + +G+A++ F + + ++ A++
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 609 MDGGQIDGQEITAA 650
M+G + + IT +
Sbjct: 172 MNGQFLCNRAITVS 185
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
I I L + I++ FS +G + S + +D +GY +V F + A+NA++
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE--DGFSKGYGFVHFETEEAAQNAIQK 179
Query: 609 MDGGQIDGQEI 641
++G + G+++
Sbjct: 180 VNGMLLAGKKV 190
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/73 (20%), Positives = 37/73 (50%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T +++ + ++ + ++F+ +G + S E +G+ +V F N +EAE A+
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVE---GKSKGFGFVAFANPEEAETAV 269
Query: 603 KHMDGGQIDGQEI 641
+ + I+G ++
Sbjct: 270 QALHDSTIEGTDL 282
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
I I L + I++ FS +G + S + +D +GY +V F + A+NA++
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE--DGFSKGYGFVHFETEEAAQNAIQK 116
Query: 609 MDGGQIDGQEI 641
++G + G+++
Sbjct: 117 VNGMLLAGKKV 127
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/73 (20%), Positives = 37/73 (50%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T +++ + ++ + ++F+ +G + S E +G+ +V F N +EAE A+
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE---GKSKGFGFVAFANPEEAETAV 206
Query: 603 KHMDGGQIDGQEI 641
+ + I+G ++
Sbjct: 207 QALHDSTIEGTDL 219
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
I I L + I++ FS +G + S + +D +GY +V F + A+NA++
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE--DGFSKGYGFVHFETEEAAQNAIQK 179
Query: 609 MDGGQIDGQEI 641
++G + G+++
Sbjct: 180 VNGMLLAGKKV 190
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/73 (20%), Positives = 37/73 (50%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T +++ + ++ + ++F+ +G + S E +G+ +V F N +EAE A+
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE---GKSKGFGFVAFANPEEAETAV 269
Query: 603 KHMDGGQIDGQEI 641
+ + I+G ++
Sbjct: 270 QALHDSTIEGTDL 282
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 35.1 bits (77), Expect = 0.067
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
+ IG + N T + + E F G + P D+ + +AY+EF+++ ENA+
Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQ-KNFAYIEFDDSSSIENAL 119
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 477 EIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKHMDGGQIDGQEI 641
++FS +G + +++ D +GYA+V +N EA NAM ++G + G+ +
Sbjct: 392 QLFSQFGAIVNVKILRDLTQ--QCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTL 444
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/72 (20%), Positives = 31/72 (43%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+H+ + + +F G V +E + +G+ +V N D+A+ A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE---RGSKGFGFVTMQNPDDADRARA 157
Query: 606 HMDGGQIDGQEI 641
+G I+G+ +
Sbjct: 158 EFNGTTIEGRRV 169
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+++G++ N + YG + +I G+A+V+F ++ +AE+A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---------GFAFVDFEDSRDAEDACH 53
Query: 606 HMDGGQIDGQEI 641
+DG ++G +
Sbjct: 54 DLDGKTMEGSSM 65
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+++G++ N + YG + +I G+A+V+F ++ +AE+A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---------GFAFVDFEDSRDAEDACH 53
Query: 606 HMDGGQIDGQEI 641
+DG ++G +
Sbjct: 54 DLDGKTMEGSSM 65
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+++G++ N + YG + +I G+A+V+F ++ +AE+A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---------GFAFVDFEDSRDAEDACH 53
Query: 606 HMDGGQIDGQEI 641
+DG ++G +
Sbjct: 54 DLDGKTMEGSSM 65
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/72 (20%), Positives = 31/72 (43%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+H+ + + +F G V +E + +G+ +V N D+A+ A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE---RGSKGFGFVTMQNPDDADRARA 157
Query: 606 HMDGGQIDGQEI 641
+G I+G+ +
Sbjct: 158 EFNGTTIEGRRV 169
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +3
Query: 444 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKHMDGGQ 623
L+ T + ++F +G + + DR N RG+ ++ FN ++A A +
Sbjct: 83 LSSYTTEKDLRDVFGEFGEINKCDLVYDR-PSGNSRGFGFIYFNLIEDATAARDKLCNTD 141
Query: 624 IDGQEI 641
+DG +I
Sbjct: 142 LDGHKI 147
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+ +G L V + E+FS +G + +G+G+A++ + AE+A +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL--------SGKGFAFLRLDTRAHAESAKE 168
Query: 606 HMDGGQIDGQEI 641
+DG I G+++
Sbjct: 169 AIDGRIIHGRQV 180
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+ +G L V + E+FS +G + +G+G+A++ + AE+A +
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL--------SGKGFAFLRLDTRAHAESAKE 168
Query: 606 HMDGGQIDGQEI 641
+DG I G+++
Sbjct: 169 AIDGRIIHGRQV 180
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
++I + VT + ++E+F Y ++ ++ D YA++ FN D+ AM+
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKD---------YAFIHFNERDDCLKAMEE 429
Query: 609 MDGGQIDGQEITAA 650
+G +++G + A+
Sbjct: 430 WNGKELEGTVVEAS 443
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/73 (20%), Positives = 37/73 (50%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
T +++ + ++ + ++F+ +G + S E +G+ +V F N +EAE A+
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE---GKSKGFGFVAFANPEEAETAV 209
Query: 603 KHMDGGQIDGQEI 641
+ + I+G ++
Sbjct: 210 QALHDSTIEGTDL 222
>Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 609 MDGGQIDGQE 638
+ G QI +
Sbjct: 285 LQGFQITAND 294
>Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 609 MDGGQIDGQE 638
+ G QI +
Sbjct: 285 LQGFQITAND 294
>X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 609 MDGGQIDGQE 638
+ G QI +
Sbjct: 285 LQGFQITAND 294
>X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ + L+ V D + +F + F RLH NG A+VE+++ +A AM
Sbjct: 230 LFVANLSAEVNEDTLRGVFKAFSG-----FTRLRLHNKNGSCVAFVEYSDLQKATQAMIS 284
Query: 609 MDGGQIDGQE 638
+ G QI +
Sbjct: 285 LQGFQITAND 294
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 426 RIHIGRLTLNV-TRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAM 602
R+ IG + + TRD I E+F +G + ++ + +G+ +V+FN A A+ +
Sbjct: 84 RVFIGNIARAIITRDDIIELFRPFGKIIAVNY-------FAQQGFGFVQFNEAGSADESC 136
Query: 603 KHMDG 617
+ ++G
Sbjct: 137 RSLNG 141
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A+ A++
Sbjct: 264 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 317
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A+ A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A+ A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A+ A++
Sbjct: 264 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 317
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A+ A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
+H+ L + + DH F +YG V + D + ++ + +A V+F N D+A+ A++
Sbjct: 279 VHVPHLDRH-SPDHYRRRFESYGQVIDV----DMVKSNDNKAFAVVQFTNIDDAQKALQ 332
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 465 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAENAMKHMDGGQIDGQEI 641
+ + + S YG V+S+E P HP G G +VEF + + + A + G + + +
Sbjct: 422 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTV 481
Query: 642 TAA 650
+
Sbjct: 482 VTS 484
>AC024875-4|AAK29990.1| 143|Caenorhabditis elegans U2af splicing
factor protein 1,isoform b protein.
Length = 143
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 465 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAENAMKHMDGGQIDGQEI 641
+ + + S YG V+S+E P HP G G +VEF + + + A + G + + +
Sbjct: 69 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTV 128
Query: 642 TAA 650
+
Sbjct: 129 VTS 131
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 465 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAENAMKHMDGGQIDGQEI 641
+ + + S YG V+S+E P HP G G +VEF + + + A + G + + +
Sbjct: 422 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTV 481
Query: 642 TAA 650
+
Sbjct: 482 VTS 484
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 465 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAENAMKHMDGGQIDGQEI 641
+ + + S YG V+S+E P HP G G +VEF + + + A + G + + +
Sbjct: 397 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTV 456
Query: 642 TAA 650
+
Sbjct: 457 VTS 459
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 465 DHIHEIFSTYGTVKSIEFPMD-RLHPHNGRGYAYVEFNNADEAENAMKHMDGGQIDGQEI 641
+ + + S YG V+S+E P HP G G +VEF + + + A + G + + +
Sbjct: 400 EDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTV 459
Query: 642 TAA 650
+
Sbjct: 460 VTS 462
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
RI +G + T + E F + VK ++ M + +GY ++ F D+AE K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVK--MVKSLDGQSKGYGFITFETEDQAEEIRK 124
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R+ G L V+ + + + F Y + + + + + +GY +V F ++++ AM+
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRES-RTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 606 HMDGGQIDGQEI 641
MDG + + I
Sbjct: 263 EMDGKYVGNRPI 274
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 31.5 bits (68), Expect = 0.83
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
RI +G + T + E F + VK ++ M + +GY ++ F D+AE K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVK--MVKSLDGQSKGYGFITFETEDQAEEIRK 125
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 268 VMLIGRRLEIDHQQEKKKNLCY--LYQMTKLKLRKNRNDLQDVRSENAHHHHDQLVSTLD 441
V+ R I HQQ+K+ N Y L + + NR +L+D+R+ + + S L+
Sbjct: 201 VLCSEHRSTIPHQQQKRMNAMYSNLMYFGEFQHTSNRRELKDIRAATETEYDTLVASALE 260
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/72 (20%), Positives = 35/72 (48%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
R++IGRL + + F YG + + G+ +V+F + +A++A+
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMK---------NGFGFVDFQDQRDADDAVH 53
Query: 606 HMDGGQIDGQEI 641
++G ++ G+ +
Sbjct: 54 DLNGKELCGERV 65
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKH 608
+ I R+ + F +G V I +R N +G+AYV F+N AE A +
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNR-RTGNHKGWAYVGFDNKAVAEIAAES 92
Query: 609 MDG 617
M+G
Sbjct: 93 MNG 95
>Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/82 (19%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMD-RLHPHNGRGYAYVEFNNADEAENAM 602
+H+ ++ + TRDHI+ +F+ G ++ ++ +P + + + A+++F++ +
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDD-ERCVEVA 70
Query: 603 KHMDGGQIDGQEITAAPVLVPV 668
+H+ + I P PV
Sbjct: 71 QHLTNTVVIDCAIVCLPYPNPV 92
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/82 (19%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMD-RLHPHNGRGYAYVEFNNADEAENAM 602
+H+ ++ + TRDHI+ +F+ G ++ ++ +P + + + A+++F++ +
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDD-ERCVEVA 70
Query: 603 KHMDGGQIDGQEITAAPVLVPV 668
+H+ + I P PV
Sbjct: 71 QHLTNTVVIDCAIVCLPYPNPV 92
>Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/82 (19%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMD-RLHPHNGRGYAYVEFNNADEAENAM 602
+H+ ++ + TRDHI+ +F+ G ++ ++ +P + + + A+++F++ +
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDD-ERCVEVA 70
Query: 603 KHMDGGQIDGQEITAAPVLVPV 668
+H+ + I P PV
Sbjct: 71 QHLTNTVVIDCAIVCLPYPNPV 92
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/82 (19%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +3
Query: 429 IHIGRLTLNVTRDHIHEIFSTYGTVKSIE-FPMD-RLHPHNGRGYAYVEFNNADEAENAM 602
+H+ ++ + TRDHI+ +F+ G ++ ++ +P + + + A+++F++ +
Sbjct: 12 LHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDD-ERCVEVA 70
Query: 603 KHMDGGQIDGQEITAAPVLVPV 668
+H+ + I P PV
Sbjct: 71 QHLTNTVVIDCAIVCLPYPNPV 92
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 435 IGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG-RGYAYVEFNNADEAENAMKHM 611
IG + + T + + ++F+ G + + R++ + +GY ++EF DEA + +
Sbjct: 72 IGDVPTDWTEETLSQVFTECGHAP---YKVKRVYVKDELKGYCFIEFITFDEARQTLYDL 128
Query: 612 DGGQIDG 632
+G +I G
Sbjct: 129 NGNRIPG 135
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 423 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNG--RGYAYVEFNNADEAEN 596
+++ + + T D + +FS +GTV S+ R+ +G +G A+V+F+ A+
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTVTSVR----RVTHKDGKPKGIAFVDFDTEASAQK 738
Query: 597 AMKHMDGGQIDGQEITAAPVLVPV 668
+ D + +E+ A PV
Sbjct: 739 CVASGDKLMLRERELEVALSNPPV 762
>Z82060-3|CAB04883.1| 206|Caenorhabditis elegans Hypothetical
protein T27F6.4 protein.
Length = 206
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 313 KKKNLCYLYQMTKLKLRKN--RNDLQDVRSENAHHHHDQL 426
KKK+ +T LK RK + L V S + HHHH L
Sbjct: 83 KKKDRSEKNVVTNLKYRKPTANHHLDSVHSSSEHHHHHHL 122
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +3
Query: 480 IFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMKHMDGGQIDGQEI 641
+F G V +E + +G+ +V N D+A+ A +G I+G+ +
Sbjct: 1 MFEKVGPVVDVEIIFNE---RGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRV 51
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 370 RNDLQDVRSENAHHHHDQLVSTL 438
+N +Q + + AHHHH QLV +
Sbjct: 126 QNLVQQQQQQQAHHHHQQLVGEM 148
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 370 RNDLQDVRSENAHHHHDQLVSTL 438
+N +Q + + AHHHH QLV +
Sbjct: 126 QNLVQQQQQQQAHHHHQQLVGEM 148
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 370 RNDLQDVRSENAHHHHDQLVSTL 438
+N +Q + + AHHHH QLV +
Sbjct: 159 QNLVQQQQQQQAHHHHQQLVGEM 181
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/72 (19%), Positives = 31/72 (43%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
RI++ + + + +F YG V S+E + +G+ +V ++ + E A
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIV---TNDRGSKGFGFVTLDSIESCEKARA 108
Query: 606 HMDGGQIDGQEI 641
+ + G+ I
Sbjct: 109 ALHESHVQGRII 120
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 370 RNDLQDVRSENAHHHHDQLVSTL 438
+N +Q + + AHHHH QLV +
Sbjct: 159 QNLVQQQQQQQAHHHHQQLVGEM 181
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/72 (19%), Positives = 31/72 (43%)
Frame = +3
Query: 426 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVEFNNADEAENAMK 605
RI++ + + + +F YG V S+E + +G+ +V ++ + E A
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIV---TNDRGSKGFGFVTLDSIESCEKARA 108
Query: 606 HMDGGQIDGQEI 641
+ + G+ I
Sbjct: 109 ALHESHVQGRII 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,062,104
Number of Sequences: 27780
Number of extensions: 258405
Number of successful extensions: 1105
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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