Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_I13
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 105 3e-23
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 105 3e-23
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 100 1e-21
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 38 0.006
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical pr... 31 0.90
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.8
AF067623-1|AAC17553.2| 640|Caenorhabditis elegans Hypothetical ... 29 3.6
Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 28 8.4
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 105 bits (253), Expect = 3e-23
Identities = 50/67 (74%), Positives = 53/67 (79%)
Frame = +1
Query: 43 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 222
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 223 VFPVVLG 243
+FPVVLG
Sbjct: 63 LFPVVLG 69
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +2
Query: 245 HERAGGIVESVGEGVTSVKPGDHVVPLLRP 334
HE GIVESVGEGVT PGDHVVPL P
Sbjct: 70 HE-GSGIVESVGEGVTGFAPGDHVVPLYVP 98
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 105 bits (253), Expect = 3e-23
Identities = 50/67 (74%), Positives = 53/67 (79%)
Frame = +1
Query: 43 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 222
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 223 VFPVVLG 243
+FPVVLG
Sbjct: 63 LFPVVLG 69
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +2
Query: 245 HERAGGIVESVGEGVTSVKPGDHVVPLLRP 334
HE GIVESVGEGVT PGDHVVPL P
Sbjct: 70 HE-GSGIVESVGEGVTGFAPGDHVVPLYVP 98
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 100 bits (240), Expect = 1e-21
Identities = 50/69 (72%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Frame = +1
Query: 43 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVK--ITATGVCHTDAYTLSGKDP 216
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVK I T VCHTDAYTL G DP
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDP 62
Query: 217 EGVFPVVLG 243
EG+FPVVLG
Sbjct: 63 EGLFPVVLG 71
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = +2
Query: 245 HERAGGIVESVGEGVTSVKPGDHVVPLLRP 334
HE GIVESVGEGVT PGDHVVPL P
Sbjct: 72 HE-GSGIVESVGEGVTGFAPGDHVVPLYVP 100
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/91 (38%), Positives = 43/91 (47%)
Frame = +2
Query: 62 LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRIHSPEKILRECFL*YW 241
+ A P S G Q +R KW +KP K AL+ S T ++ + E
Sbjct: 181 IPARPPSPGAQKLHSRLKRSKWLHRKPTKFALKYILYTSVCHTDAYTLDGHDPEGLFPVV 240
Query: 242 EHERAGGIVESVGEGVTSVKPGDHVVPLLRP 334
GIVESVG+GVT PGDHVVPL P
Sbjct: 241 LGHEGSGIVESVGKGVTGFAPGDHVVPLYVP 271
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +1
Query: 160 ITATGVCHTDAYTLSGKDPEGVFPVVLG 243
I T VCHTDAYTL G DPEG+FPVVLG
Sbjct: 215 ILYTSVCHTDAYTLDGHDPEGLFPVVLG 242
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 94 GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 207
G PL + ++ V P+ E+ VKI +G+CH+D +T G
Sbjct: 19 GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEG 56
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 58 VIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 207
V K A+ +E+ G PL I+++ + P E+ VK+ +G+CH+D +T G
Sbjct: 6 VPKTQRALIFESYGGPLEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLG 56
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 100 PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFPVVLG 243
PL + ++ V P E+ VKI +G+CH+D + G KD V P+V G
Sbjct: 20 PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKD-MSVCPLVGG 68
>Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical
protein F26A3.6 protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 70 LAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAY 195
L A+ + + PL E I DP + +++T T VC DAY
Sbjct: 284 LVAMRYCSCHPLMAELIHYDPSSYRDFLLRVTQTSVCSVDAY 325
>Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical
protein W09H1.5 protein.
Length = 344
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 260 GIVESVGEGVTSVKPGDHVVP 322
G V SVG V+S+K GDHV+P
Sbjct: 85 GKVISVGSNVSSIKVGDHVIP 105
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 236 TTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLIT 57
T G++ G+ SV +S + T T+P+ STS SS +P+S A +
Sbjct: 1531 TVGSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSSTAANTGSSTS 1590
Query: 56 LPTVDMT 36
PTV T
Sbjct: 1591 GPTVATT 1597
>AF067623-1|AAC17553.2| 640|Caenorhabditis elegans Hypothetical
protein T26C12.1 protein.
Length = 640
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 354 FYMCCTVGRNRGTTWSPGLTEVTPSPTLSTIP 259
FY+ C V R G W+P +TP PT +P
Sbjct: 243 FYLRCHVSRQFGNAWAP--QTITPLPTNIPMP 272
>Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical
protein R05H10.7 protein.
Length = 226
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 13 LIWQLSSAVMSTVGKVIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTD 189
L + S+ V + G+++ CL AW+ + + EVD + I CH D
Sbjct: 55 LQFPFSTVVTTQSGEIVACLVNSAWKRDDNAVEGADYEVDEGLTENMTAFIKMLNTCHED 114
Query: 190 AYTLS 204
+ L+
Sbjct: 115 FWNLA 119
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 103 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLS 204
L +E+ + P +V VKI G+C +D + L+
Sbjct: 16 LRLEQAPISKPGPRQVLVKINTVGICGSDVHFLT 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,141,700
Number of Sequences: 27780
Number of extensions: 189305
Number of successful extensions: 653
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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