Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_I09
         (832 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    29   0.070
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   4.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   6.0  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 0.070
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 321 KIASLVEPEVIEVCKCLKRLQYNEGSTTTVHLAGGIAGVTGLGAPEVANEP 473
           K+++ + P   E+ K  KRL+    +TTT+H    I G    G    + +P
Sbjct: 80  KVSTTIVPTTQEINKPFKRLELFNITTTTIHSIHSIDGDEENGLTSESTDP 130


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +3

Query: 501 LYLALQRFLLLGQGLNETEWSSYAISKFHGWFFGGVAQWLDI 626
           ++ ++   LLL    N  EW  YA       F  G  +WLDI
Sbjct: 544 VFTSIASLLLLNLSENHIEWFDYA-------FIPGNLKWLDI 578


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 490 VVPIDKGSLATSGAPSPVTPAMP 422
           + P +  SL+TSG+   +TP  P
Sbjct: 302 IEPAEAESLSTSGSSGILTPVSP 324


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -3

Query: 119 LYHCLIQYFVHVKFPSVISQPTIRSLREQIYTLRNIQY 6
           L+H    +     FPSV S+   R+L   +    N +Y
Sbjct: 181 LFHDASNFIAMETFPSVYSKTRRRALEHTLDRFHNDKY 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,153
Number of Sequences: 438
Number of extensions: 5295
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)