Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_I07
(814 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 24 1.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 3.4
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 3.4
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 3.4
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 3.4
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 3.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 7.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 7.8
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 7.8
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 7.8
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 7.8
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.8 bits (49), Expect = 1.9
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 157 FVEYKLYENIFIETNLQSADYDAVILILYPEELNVPLPRHIGSFVD-GIGKLDKHIHKSA 333
F+E + + + QS + + ++L + PE + V + + +G+ +D K+ H++
Sbjct: 213 FLETRQSLEVQLVIEEQSTEQERLLLSVLPEHVAVKMRQDLGASLDTQFKKIYMSRHENV 272
Query: 334 TVWQCDYV 357
++ D V
Sbjct: 273 SILYADIV 280
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 3.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 139 DRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 288
+R K P + L N + +N + +Y + I Y E++ VP+P + G+F
Sbjct: 74 ERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 3.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 139 DRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 288
+R K P + L N + +N + +Y + I Y E++ VP+P + G+F
Sbjct: 74 ERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 3.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 139 DRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 288
+R K P + L N + +N + +Y + I Y E++ VP+P + G+F
Sbjct: 74 ERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 3.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 139 DRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 288
+R K P + L N + +N + +Y + I Y E++ VP+P + G+F
Sbjct: 74 ERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 3.4
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 139 DRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 288
+R K P + L N + +N + +Y + I Y E++ VP+P + G+F
Sbjct: 74 ERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 7.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 114 FGDIELQANTRRDGSCGAET 55
FG+I L N RR S AET
Sbjct: 520 FGEICLLTNARRVASVRAET 539
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 7.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 114 FGDIELQANTRRDGSCGAET 55
FG+I L N RR S AET
Sbjct: 488 FGEICLLTNARRVASVRAET 507
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 7.8
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 59 SAPQLPSLRVLACNSMSPKRAFTT*STIVQKCRSSNTSYTRIFSSKQTFSRLITMR*S*S 238
S+P+ S + S SP+ A +T +T+V SN ++ + L + S S
Sbjct: 825 SSPRYLSAAATSSTSTSPRPASSTAATLVLSGCPSNMMELQV-DIADSQQPLNLSKKSPS 883
Query: 239 FTPRNLTCHCRDIS 280
+PR L C+ +S
Sbjct: 884 PSPRPLVGPCKALS 897
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 625 EKRTENFEKIVRNAIAFERARV 690
EKR+ +F+ + + +F+RAR+
Sbjct: 236 EKRSTDFQDVESGSESFKRARM 257
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 625 EKRTENFEKIVRNAIAFERARV 690
EKR+ +F+ + + +F+RAR+
Sbjct: 236 EKRSTDFQDVESGSESFKRARM 257
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,212
Number of Sequences: 438
Number of extensions: 4949
Number of successful extensions: 68
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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