Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_I03
         (836 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1371 - 26100553-26101767                                         33   0.37 
07_01_0699 - 5276790-5278826                                           31   0.86 
07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261...    28   8.0  
04_03_0448 - 16020773-16021066,16023040-16023291,16023470-160236...    28   8.0  
04_03_0132 - 11647230-11647432,11647520-11647982,11648159-116482...    28   8.0  
02_03_0134 - 15596379-15597689                                         28   8.0  

>07_03_1371 - 26100553-26101767
          Length = 404

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +3

Query: 630 RQELRSGNYXLQVYLVYGFSDAAVRPGPRCC*SCSHFQ----KPDGRTWXQA 773
           +Q+LR G   L    V GFS A  RP P  C S SH++    +P  R W +A
Sbjct: 18  KQQLRFGASTLSAEHVSGFSSA--RPAPSLCCSSSHWRAVKLRPRRRPWRRA 67


>07_01_0699 - 5276790-5278826
          Length = 678

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = -3

Query: 678 KPGKLGADNFQSEVPVFADSCEMRNGFVELPDGARPSV 565
           +PG +  D  QS VP FA     RN FV LP+G+R  V
Sbjct: 233 QPGSIYEDELQSFVPEFA----ARNLFVSLPEGSRDVV 266


>07_03_0762 +
           21324550-21325414,21325606-21325746,21325993-21326177,
           21326200-21326410,21326526-21326769,21326853-21327003,
           21327089-21327439
          Length = 715

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 23/74 (31%), Positives = 32/74 (43%)
 Frame = -1

Query: 467 GYWLRNFCLSANGYSSAQYLSQLSNCFELNPYLKPTPSNGGTKGLRFLMRSLSSFTIVSL 288
           G W  NF      + S + L QL    E  P   P PS   T G +   R  +   IV  
Sbjct: 249 GVWC-NFRYEVFPFFSGRPLLQLPAFVETPP---PPPSPSATSGEKTKNRIGTVLAIVMP 304

Query: 287 KVISKGLVLVSCFC 246
            + +  L++V+CFC
Sbjct: 305 AIAAILLMVVACFC 318


>04_03_0448 -
           16020773-16021066,16023040-16023291,16023470-16023605,
           16023713-16023937,16024467-16024851,16025142-16025421
          Length = 523

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 549 YYFNVFRDLWSNPHEVNIQTLDISLEMRILVKELLPFSEW 430
           Y F   R+   NP  + +  LD +L  R+ +KEL   S W
Sbjct: 184 YMFEYGREDGHNPVILELAKLDFNLLQRVHLKELKEISRW 223


>04_03_0132 -
           11647230-11647432,11647520-11647982,11648159-11648271,
           11648956-11649412
          Length = 411

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 403 WLKYWAEEYPFAERQKFLNQYPHF 474
           W KY+  +  +A R  FL  YPHF
Sbjct: 344 WGKYFLVDSGYASRYGFLPSYPHF 367


>02_03_0134 - 15596379-15597689
          Length = 436

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 226 TTPPGRA*ASAVDSSERGGTMVWTPALTAARR*KEDV 116
           T  P        D S  GG+ VW PALTA  R  +D+
Sbjct: 96  TAKPANTTKGKADKS--GGSSVWPPALTARNRSSKDM 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,621,595
Number of Sequences: 37544
Number of extensions: 554360
Number of successful extensions: 1614
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)