Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_I03
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64852-7|AAB04970.1| 452|Caenorhabditis elegans Hypothetical pr... 143 1e-34
Z74029-6|CAM84812.1| 457|Caenorhabditis elegans Hypothetical pr... 94 1e-19
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 30 2.3
AC084154-7|AAO91685.1| 304|Caenorhabditis elegans F-box a prote... 30 2.3
Z81112-2|CAB03274.1| 185|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z50177-3|CAA90545.2| 765|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC024790-12|AAL32248.2| 97|Caenorhabditis elegans Hypothetical... 29 4.1
AF039044-9|AAG24119.1| 168|Caenorhabditis elegans Hypothetical ... 29 5.4
U13019-8|AAC24446.2| 238|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 28 9.5
U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U64852-7|AAB04970.1| 452|Caenorhabditis elegans Hypothetical
protein W01A11.1 protein.
Length = 452
Score = 143 bits (347), Expect = 1e-34
Identities = 82/222 (36%), Positives = 126/222 (56%), Gaps = 9/222 (4%)
Frame = +1
Query: 196 PMPKLDLEE--WWGPPELKQKQDTSTKPFEITFSETMVKELKERIKKRRPFVPPLEGVG- 366
P ++++EE ++G + K +T KPF++ ++++ +LK R++ R LE
Sbjct: 25 PEKEINVEENNYYGSGKAKP-DNTEIKPFKVNVEQSVIDDLKHRLQNARISHSVLEDSDD 83
Query: 367 FKYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFKTNIQGLNIHFMRITPKVPKDVE- 543
F YGFNSKQL YW +Y + +++ +NQ+P FKT I+GL +HF+ + P PK +
Sbjct: 84 FYYGFNSKQLLKLRDYWLNKYDWRKQEATINQFPQFKTEIEGLQVHFLHVKP--PKSYKN 141
Query: 544 IVPLLLLHGWPGSVREFYEAIPHLTAVSK---DRNFALEIIXSKFTWF--MAFPTRRFVP 708
+ P+L+ HGWPG+V EFY+ IP LT K D +FA E+I + P +
Sbjct: 142 VKPILVAHGWPGNVFEFYKFIPLLTDPKKHGIDSDFAFEVIAPSIPGYGWSDQPKKTGFS 201
Query: 709 XLAAAEVAVIFKNLMAGLGXKQYYVQGGDWGAXIGSAMATFF 834
LA A V F+ LM LG ++Y+QGGDWGA I S + +
Sbjct: 202 QLACARV---FRKLMLRLGYNKFYLQGGDWGAIITSLLTKVY 240
>Z74029-6|CAM84812.1| 457|Caenorhabditis elegans Hypothetical
protein C45B11.6 protein.
Length = 457
Score = 93.9 bits (223), Expect = 1e-19
Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 9/235 (3%)
Frame = +1
Query: 157 SIPLYLLVLKSPPPMPKLDLEEWWGPPELKQKQDTSTKPFEITFSETMVKELKERIKKRR 336
SI L + + K P ++D +++W + +K D + F I E+ V KE+++ R
Sbjct: 16 SILLSIYIHKPDFPPLEIDPDDYWKLDD-PEKDDDTIYSFTIDIKESEVSNFKEKLESER 74
Query: 337 PFVPPLEGVGFKYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFKTNIQGLNIHFMRI 516
F+P L + N LK + + + Q FLN + +KT I+GL IHF+R+
Sbjct: 75 -FLPTLYDTNYDNYLNE------LKQVLLGFNWKQHQHFLNTFKQYKTEIEGLKIHFLRV 127
Query: 517 -TPKVPKDVEIVPLLLLHGWPGSVREFYEAIPHLTAVSK-------DRNFALEIIXSKFT 672
TP K +VPLL+ HG+PGS +F++ IP LT S+ + E+I
Sbjct: 128 STPPKDKKSRVVPLLIFHGFPGSFWDFFKIIPILTNPSRHGFDFGVEEAIQFEVIVPSLP 187
Query: 673 WFMAFPTRRFVPXLAAAEVAVIFKNLMAGLGXKQYYVQGGD-WGAXIGSAMATFF 834
F+ F + A A I LM L Y+V G + +G+ + + +++ +
Sbjct: 188 GFI-FSDKPTKQGFNAIATARIIAKLMYRLNLNNYFVHGTEGYGSDVATLLSSLY 241
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical protein
C52E12.4 protein.
Length = 1487
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = -1
Query: 761 SPAIRFLKMTATSAAARXGTNRRVGKAINQVNLEXIISRAKFLSLLTAVR*GMAS*NSLT 582
+PAIR + + A + NRR G I++V I+S +LTA+ + S
Sbjct: 857 TPAIRGFRAPSLPPAPQSTHNRRGGAPIDEVPAPIILSPQNNTDMLTAISDIVDSFRGAQ 916
Query: 581 EPGHPWSNRSGTISTSL 531
E PWS +TS+
Sbjct: 917 E--EPWSKSLLRAATSI 931
>AC084154-7|AAO91685.1| 304|Caenorhabditis elegans F-box a protein
protein 74 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 349 PLEGVGFKYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFK 477
P EG G + F +Q ++ E Y F + +NQ+ HFK
Sbjct: 175 PTEGDGIEDLFQLEQFQKSRDFYMESYAFDTTKTSINQFFHFK 217
>Z81112-2|CAB03274.1| 185|Caenorhabditis elegans Hypothetical
protein T02B5.2 protein.
Length = 185
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -3
Query: 831 ESSHSATDXSSPIPSLDVVLLXTKSGHQVFENDCNFSSSEXRDEPPRRKSHKPGKLGADN 652
E S T+ S ++V K VFE D + ++S P+R HKPG L
Sbjct: 41 EMEESTTNSQQNKLSAELVKKARKIPSGVFE-DSSSTTSRKSTWTPKRPLHKPGTLEPIV 99
Query: 651 FQSEVP 634
+S+VP
Sbjct: 100 LRSDVP 105
>Z50177-3|CAA90545.2| 765|Caenorhabditis elegans Hypothetical
protein F46G10.5 protein.
Length = 765
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 433 FAERQKFLNQYPHFKTNIQGLNIHFMRITPKVPKDVEIVPLL 558
F + + N+YP FKT I F I +VP V ++PL+
Sbjct: 562 FEKCRAVTNKYPEFKTTPFDTEIGFADIILQVPLVVAVIPLV 603
>AC024790-12|AAL32248.2| 97|Caenorhabditis elegans Hypothetical
protein Y47D7A.15 protein.
Length = 97
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 309 T*RTHQ-ETKTFRPSIGGCWLQIRVQFETIGQLAQILGRRIP 431
T R H +T F+P G C +Q++ + + QLAQ LG RIP
Sbjct: 9 TDRDHSLKTMKFKPLRGACDIQMKKKRRS-RQLAQFLGIRIP 49
>AF039044-9|AAG24119.1| 168|Caenorhabditis elegans Hypothetical
protein F48G7.10 protein.
Length = 168
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 762 KSGHQVFENDCNFSSSEXRDEPPRRKSHKPGKL 664
K H + + CNF S R PP+ S G+L
Sbjct: 66 KRCHSLINDRCNFGPSSPRQPPPQELSSDSGEL 98
>U13019-8|AAC24446.2| 238|Caenorhabditis elegans Hypothetical
protein T12A2.7 protein.
Length = 238
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 239 NLSRNRIPAPNPSRSLSVKRW*KNLKNA-SRNEDL 340
++SR +PAP+ + + K W K L+NA ++NE L
Sbjct: 93 DMSRCELPAPSAVKGVDRKLWAKVLRNAKAQNEHL 127
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical protein
ZK593.5 protein.
Length = 1326
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 289 SETMVKELKERIKKRRPFVPPLEGVGFKYGFNSKQLDSWLKYWAEEYPF 435
+E MV+E++ KR F L V N + W W EEYPF
Sbjct: 1255 TEKMVEEMEIFNVKREQFFDKLNSV------NRRLRRVWFDAWGEEYPF 1297
>U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical
protein K09C4.10 protein.
Length = 1035
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 355 EGVGFKYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFKTNI 486
+GV + ++ ++ + W+E P A+ KF N+ H++T +
Sbjct: 303 QGVKALERYETENMNEEVTDWSEPKPLAKFYKFFNKTLHYETTV 346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,925,474
Number of Sequences: 27780
Number of extensions: 441006
Number of successful extensions: 1311
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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