Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_I02
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 155 4e-38
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 155 4e-38
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 155 4e-38
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 155 4e-38
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 155 4e-38
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 155 4e-38
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 155 4e-38
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 155 4e-38
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 155 4e-38
Z69791-6|CAL36514.1| 241|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z69791-5|CAL36513.1| 281|Caenorhabditis elegans Hypothetical pr... 40 0.002
DQ118141-1|AAZ23152.1| 241|Caenorhabditis elegans hox cofactor ... 40 0.002
Z79759-8|CAE45097.1| 619|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 28 9.9
Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical pr... 28 9.9
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 155 bits (376), Expect = 4e-38
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +3
Query: 291 ERQRRYLRASPXSPXLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQI 461
+R + + A P P L L+FEKCELAT TPRD G DVCSS SF +D+ F +
Sbjct: 57 KRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHT 116
Query: 462 RQ--EKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLV 635
++ +K YY+ +P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKGKMP+D+V
Sbjct: 117 QENADKQYYVPNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 176
Query: 636 IDXR-ETARPPDANGEPG 686
D R +++PP + G G
Sbjct: 177 GDERASSSQPPMSPGSMG 194
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 155 bits (376), Expect = 4e-38
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +3
Query: 291 ERQRRYLRASPXSPXLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQI 461
+R + + A P P L L+FEKCELAT TPRD G DVCSS SF +D+ F +
Sbjct: 57 KRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHT 116
Query: 462 RQ--EKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLV 635
++ +K YY+ +P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKGKMP+D+V
Sbjct: 117 QENADKQYYVPNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 176
Query: 636 IDXR-ETARPPDANGEPG 686
D R +++PP + G G
Sbjct: 177 GDERASSSQPPMSPGSMG 194
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 155 bits (376), Expect = 4e-38
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +3
Query: 291 ERQRRYLRASPXSPXLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQI 461
+R + + A P P L L+FEKCELAT TPRD G DVCSS SF +D+ F +
Sbjct: 94 KRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHT 153
Query: 462 RQ--EKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLV 635
++ +K YY+ +P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKGKMP+D+V
Sbjct: 154 QENADKQYYVPNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 213
Query: 636 IDXR-ETARPPDANGEPG 686
D R +++PP + G G
Sbjct: 214 GDERASSSQPPMSPGSMG 231
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 155 bits (376), Expect = 4e-38
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +3
Query: 291 ERQRRYLRASPXSPXLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQI 461
+R + + A P P L L+FEKCELAT TPRD G DVCSS SF +D+ F +
Sbjct: 94 KRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHT 153
Query: 462 RQ--EKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLV 635
++ +K YY+ +P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKGKMP+D+V
Sbjct: 154 QENADKQYYVPNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 213
Query: 636 IDXR-ETARPPDANGEPG 686
D R +++PP + G G
Sbjct: 214 GDERASSSQPPMSPGSMG 231
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 155 bits (376), Expect = 4e-38
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +3
Query: 291 ERQRRYLRASPXSPXLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQI 461
+R + + A P P L L+FEKCELAT TPRD G DVCSS SF +D+ F +
Sbjct: 20 KRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHT 79
Query: 462 RQ--EKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLV 635
++ +K YY+ +P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKGKMP+D+V
Sbjct: 80 QENADKQYYVPNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 139
Query: 636 IDXR-ETARPPDANGEPG 686
D R +++PP + G G
Sbjct: 140 GDERASSSQPPMSPGSMG 157
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 155 bits (376), Expect = 4e-38
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +3
Query: 291 ERQRRYLRASPXSPXLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQI 461
+R + + A P P L L+FEKCELAT TPRD G DVCSS SF +D+ F +
Sbjct: 57 KRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHT 116
Query: 462 RQ--EKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLV 635
++ +K YY+ +P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKGKMP+D+V
Sbjct: 117 QENADKQYYVPNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 176
Query: 636 IDXR-ETARPPDANGEPG 686
D R +++PP + G G
Sbjct: 177 GDERASSSQPPMSPGSMG 194
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 155 bits (376), Expect = 4e-38
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +3
Query: 291 ERQRRYLRASPXSPXLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQI 461
+R + + A P P L L+FEKCELAT TPRD G DVCSS SF +D+ F +
Sbjct: 57 KRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHT 116
Query: 462 RQ--EKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLV 635
++ +K YY+ +P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKGKMP+D+V
Sbjct: 117 QENADKQYYVPNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 176
Query: 636 IDXR-ETARPPDANGEPG 686
D R +++PP + G G
Sbjct: 177 GDERASSSQPPMSPGSMG 194
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 155 bits (376), Expect = 4e-38
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +3
Query: 291 ERQRRYLRASPXSPXLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQI 461
+R + + A P P L L+FEKCELAT TPRD G DVCSS SF +D+ F +
Sbjct: 94 KRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHT 153
Query: 462 RQ--EKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLV 635
++ +K YY+ +P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKGKMP+D+V
Sbjct: 154 QENADKQYYVPNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 213
Query: 636 IDXR-ETARPPDANGEPG 686
D R +++PP + G G
Sbjct: 214 GDERASSSQPPMSPGSMG 231
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 155 bits (376), Expect = 4e-38
Identities = 73/138 (52%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
Frame = +3
Query: 291 ERQRRYLRASPXSPXLALIFEKCELATCTPRDP---GVAGGDVCSSESFNEDIAVFSKQI 461
+R + + A P P L L+FEKCELAT TPRD G DVCSS SF +D+ F +
Sbjct: 94 KRDKESIYAHPLYPLLVLLFEKCELATSTPRDTSRDGSTSSDVCSSASFKDDLNEFVRHT 153
Query: 462 RQ--EKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLV 635
++ +K YY+ +P++D +M+Q+IQ+LRFHLLELEKVHELCDNFC+RY+ CLKGKMP+D+V
Sbjct: 154 QENADKQYYVPNPQLDQIMLQSIQMLRFHLLELEKVHELCDNFCNRYVVCLKGKMPLDIV 213
Query: 636 IDXR-ETARPPDANGEPG 686
D R +++PP + G G
Sbjct: 214 GDERASSSQPPMSPGSMG 231
>Z69791-6|CAL36514.1| 241|Caenorhabditis elegans Hypothetical
protein F39D8.2b protein.
Length = 241
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 309 LRASPXSPXLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIA 488
+ + P P + L+ EKCE A T D + E+ +DI + + Q +
Sbjct: 27 IASHPLMPIVELLLEKCETAATT--------FDRKAFET--DDIKRLFQSLEQRGVQLSS 76
Query: 489 D-PEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLK 611
+ EVD LM AI LR ++ELE+V+ L ++F +Y++ L+
Sbjct: 77 NRDEVDELMETAILALRTCMVELERVYSLMESFKAKYLATLR 118
>Z69791-5|CAL36513.1| 281|Caenorhabditis elegans Hypothetical
protein F39D8.2a protein.
Length = 281
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 309 LRASPXSPXLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIA 488
+ + P P + L+ EKCE A T D + E+ +DI + + Q +
Sbjct: 67 IASHPLMPIVELLLEKCETAATT--------FDRKAFET--DDIKRLFQSLEQRGVQLSS 116
Query: 489 D-PEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLK 611
+ EVD LM AI LR ++ELE+V+ L ++F +Y++ L+
Sbjct: 117 NRDEVDELMETAILALRTCMVELERVYSLMESFKAKYLATLR 158
>DQ118141-1|AAZ23152.1| 241|Caenorhabditis elegans hox cofactor
PSA-3 splice variantbeta protein.
Length = 241
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 309 LRASPXSPXLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIA 488
+ + P P + L+ EKCE A T D + E+ +DI + + Q +
Sbjct: 27 IASHPLMPIVELLLEKCETAATT--------FDRKAFET--DDIKRLFQSLEQRGVQLSS 76
Query: 489 D-PEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYISCLK 611
+ EVD LM AI LR ++ELE+V+ L ++F +Y++ L+
Sbjct: 77 NRDEVDELMETAILALRTCMVELERVYSLMESFKAKYLATLR 118
>Z79759-8|CAE45097.1| 619|Caenorhabditis elegans Hypothetical
protein ZK858.6 protein.
Length = 619
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 408 VCSSESFNEDIAVFSKQIRQEKPYYIADPEVDSLMVQAI 524
VCS++ E++A+F ++IRQE Y A VD+L V +
Sbjct: 103 VCSNKLSKENVALFKERIRQE---YSAHLIVDNLPVATV 138
>Z81015-2|CAB02660.1| 411|Caenorhabditis elegans Hypothetical
protein C11E4.3 protein.
Length = 411
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 8 CPIIYVYVCTCLCGVL 55
C YVYVC C+C VL
Sbjct: 376 CFRFYVYVCVCVCAVL 391
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 429 NEDIAVFSKQIRQEKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHEL 572
N D+AVF IR+ YYI S ++ I ++ L +K+ +L
Sbjct: 246 NMDLAVFEITIRRNPLYYIYMIVFPSFVINGISIVGIFLKSADKMSKL 293
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 429 NEDIAVFSKQIRQEKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHEL 572
N D+AVF IR+ YYI S ++ I ++ L +K+ +L
Sbjct: 246 NMDLAVFEITIRRNPLYYIYMIVFPSFVINGISIVGIFLKSADKMSKL 293
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 26 YVCTCLCGVLGW-ARDRNRSWWPAEPYTRARAELSWLSLGTTRASTAEVTWRGERCTTST 202
Y C+CL G + NR + A+P + + + T T + W GE C T
Sbjct: 420 YTCSCLSQYFGTNCEEINRCNY-ADPCVNGDCQTTVDGITTNYTCTCDSGWTGENCDTMI 478
Query: 203 G*PIP 217
IP
Sbjct: 479 DYCIP 483
>Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical
protein T13F3.2 protein.
Length = 391
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 510 MVQAIQVLRFHLLELEKVHELCDNFCHRY 596
M+ ++ L+ HL+ + K+ + DNFC+ +
Sbjct: 360 MMAIVKSLQKHLMNIHKIIDYADNFCNLF 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,580,329
Number of Sequences: 27780
Number of extensions: 398642
Number of successful extensions: 1247
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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