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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_H23
         (889 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   291   9e-80
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   161   9e-41
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...   158   1e-39
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...   130   3e-31
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    83   4e-17
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    81   2e-16
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    73   4e-14
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    54   2e-08
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce...    32   0.13 
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    32   0.13 
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    29   0.67 
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    28   1.5  
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur...    27   3.6  
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces...    27   3.6  
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po...    27   4.7  
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p...    26   6.2  
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual    26   8.2  
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    26   8.2  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  291 bits (714), Expect = 9e-80
 Identities = 137/167 (82%), Positives = 142/167 (85%)
 Frame = +1

Query: 265 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 444
           P    +MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 38  PRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 97

Query: 445 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 624
           PEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGD
Sbjct: 98  PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGD 157

Query: 625 GVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMXILTERGYSFXTTA 765
           GV+HTVPIYEGYALPHAI              M IL ERGY+F TTA
Sbjct: 158 GVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTA 204



 Score = 70.1 bits (164), Expect = 4e-13
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +2

Query: 155 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 262
           +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS  G+
Sbjct: 2   EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR 37



 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +2

Query: 773 EIVRDIKEXLCYVXLDFXQEM 835
           EIVRDIKE LCYV LDF QE+
Sbjct: 207 EIVRDIKEKLCYVALDFEQEL 227


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  161 bits (392), Expect = 9e-41
 Identities = 71/155 (45%), Positives = 105/155 (67%)
 Frame = +1

Query: 301 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 480
           KD  VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P    +LLTE P
Sbjct: 50  KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109

Query: 481 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 660
           +NP ANREKM + MFE +    +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE  
Sbjct: 110 MNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESV 169

Query: 661 ALPHAIXXXXXXXXXXXXXXMXILTERGYSFXTTA 765
            L H +              + +L  +GY+F  TA
Sbjct: 170 VLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTA 204



 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +2

Query: 161 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 262
           E A +V+DNG+G  K G+A D+ PR  FPS  G+
Sbjct: 2   ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score =  158 bits (383), Expect = 1e-39
 Identities = 71/134 (52%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
 Frame = +1

Query: 280 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 456
           VM    QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + ++ L   PEEH
Sbjct: 47  VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106

Query: 457 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 636
           P+LLTE PL    N+EK+ +  +ET N PA+  ++Q VL+LYAS RTTGIVL+ GDG++H
Sbjct: 107 PLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTH 166

Query: 637 TVPIYEGYALPHAI 678
           +VPIY+G+++P AI
Sbjct: 167 SVPIYDGFSIPSAI 180



 Score = 44.8 bits (101), Expect = 2e-05
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +2

Query: 173 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 262
           + +DNGSG  KAGFAGDD P+ +FP+  G+
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGR 41



 Score = 30.7 bits (66), Expect = 0.29
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 773 EIVRDIKEXLCYVXLDFXQEM 835
           EIVR+IKE  CYV  DF  E+
Sbjct: 212 EIVREIKEKCCYVASDFRSEI 232


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score =  130 bits (314), Expect = 3e-31
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 9/134 (6%)
 Frame = +1

Query: 304 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 480
           D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR  PE+H  LLTE P
Sbjct: 73  DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132

Query: 481 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSH 636
           LNP  NRE   +IMFE+FN   +Y+A+QAVL+L AS  +        TG V+DSGDGV+H
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192

Query: 637 TVPIYEGYALPHAI 678
            +P+ EGY +  +I
Sbjct: 193 IIPVAEGYVIGSSI 206



 Score = 38.3 bits (85), Expect = 0.001
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = +2

Query: 173 LVVDNGSGMCKAGFAGDDAPRAVFPS 250
           +++DNG+G  K G+AG+DAP  VFP+
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPT 33


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 83.4 bits (197), Expect = 4e-17
 Identities = 40/107 (37%), Positives = 59/107 (55%)
 Frame = +1

Query: 346 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 525
           + +K  I +G V NWD    +W +    +L+  P EHP+L+TE   NP  NR K  + MF
Sbjct: 63  MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122

Query: 526 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 666
           E+   PA Y+A Q   + +ASG+ T  ++D G   S    IY+G+ L
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169



 Score = 39.9 bits (89), Expect = 5e-04
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +2

Query: 158 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 262
           +EV+A+V+D GS   + GF+G+D P+ V PS  G+
Sbjct: 9   DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGE 43


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 81.4 bits (192), Expect = 2e-16
 Identities = 39/125 (31%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
 Frame = +1

Query: 292 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 468
           + +  + VG++   + G  ++ + P E  +++NWD ME++  +TF  +L +   EHP+ +
Sbjct: 62  LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120

Query: 469 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTV 642
           TE   NP   R  MT+++FE +N P++   I  + S Y + +  ++GIVL+ G+  SH +
Sbjct: 121 TEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVI 180

Query: 643 PIYEG 657
           P+  G
Sbjct: 181 PVLNG 185



 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 173 LVVDNGSGMCKAGFAGDDAPRAVF 244
           LV+DNGS   +AG+ G+  P+ VF
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVF 50


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 73.3 bits (172), Expect = 4e-14
 Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +1

Query: 265 PAIRXVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 438
           P+   V   +  ++ YV DE Q    I  + +K    +GI+ +W+     W      +L+
Sbjct: 37  PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96

Query: 439 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 618
           V P E+ +++TE   NP++ R+++ +  FE  + PA Y+  QAV   +A+ ++T +++D 
Sbjct: 97  VNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDI 156

Query: 619 GDGVSHTVPIYEGYALPHAI 678
           G   +   P+ +G  +   I
Sbjct: 157 GSDNASVTPVVDGLIIRKGI 176



 Score = 36.3 bits (80), Expect = 0.006
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 158 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG 259
           EE+ +LV+D GS   + G+AG+++P  + PS  G
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 54.4 bits (125), Expect = 2e-08
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
 Frame = +1

Query: 361 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 528
           PI+ G V +W+ ++  W H  Y+ L   P +    +PV L         +RE  TQ  FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171

Query: 529 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 657
               P   +A + ++ LYA G   G+V+D G   +   PI +G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDG 214


>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1666

 Score = 31.9 bits (69), Expect = 0.13
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = +1

Query: 421  FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 564
            +Y  L    E+HP+LLT+  A L P+ +  ++ +I  ++ NTP +    VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 31.9 bits (69), Expect = 0.13
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +2

Query: 545  PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 679
            P T+P  P    T PV P  S   P+   P P PS+     P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080



 Score = 27.1 bits (57), Expect = 3.6
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = +2

Query: 542  PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 679
            PP  +P  P      P VPP     P+T  P P PS      P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233



 Score = 26.6 bits (56), Expect = 4.7
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
 Frame = +2

Query: 542  PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 679
            PP   PS       +P   VPPV    P+   P P PS      P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137



 Score = 25.8 bits (54), Expect = 8.2
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +2

Query: 542  PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPS 679
            PP  +PS       +P   VPPV    P+   P P PS      P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 29.5 bits (63), Expect = 0.67
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 521 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 679
           C+  ++ PP T  S   S    P VPP S   T   + PT   ST    SP P+
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224



 Score = 28.3 bits (60), Expect = 1.5
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 521 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 679
           C+  ++ PP T  S   S    P VPP S   T   + PT   ST    +P P+
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167



 Score = 25.8 bits (54), Expect = 8.2
 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +2

Query: 533 STRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 679
           ST  P T  S   S    P VPP S   T   + PT   ST    SP P+
Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 566 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 670
           PC+     + PPV+C TP    P  C   +  H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655


>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
           deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 398

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 566 PCSRCTRPVVPPVSCWTPATVSPTPCPST 652
           P SR T+P+    S  +P  VSP   PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290


>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 466

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +2

Query: 542 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 649
           PP   P    +  T PV  PV+    A   P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402


>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 401

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 776 IVRDIKEXLCYVXLDFXQEM 835
           IV +IKE +CYV  +F ++M
Sbjct: 214 IVNEIKESVCYVSQNFKEDM 233


>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 463 LLTEAPLNPKANREKMTQIMFETFN 537
           +L  APL+ +   +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205


>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1828

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 200 TYRSHCLLPTRQLLRRTS*ISEI 132
           TYR H  +PT  LL  T  +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1016

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 548 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 691
           C +PS+    C    + PV   +  T S TP P+T  + +PTP+   T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST 869


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,382,094
Number of Sequences: 5004
Number of extensions: 70608
Number of successful extensions: 253
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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