Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H22
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 182 3e-46
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 130 1e-30
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 109 4e-24
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 103 1e-22
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 100 3e-21
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 93 3e-19
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 91 8e-19
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 90 2e-18
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 78 8e-15
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 36 0.033
02_01_0510 + 3703715-3705040 30 2.2
08_02_1064 - 24033941-24034127,24034432-24034476,24035355-240354... 29 3.8
07_01_0297 - 2156960-2157736 29 3.8
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 29 5.0
10_08_0625 + 19362303-19363853 29 6.7
12_02_1084 - 25928373-25928426,25928551-25928652,25928913-259290... 28 8.8
11_06_0513 + 24466131-24469487 28 8.8
09_02_0036 + 3217163-3217584,3217752-3218322 28 8.8
07_01_0724 + 5529642-5531141 28 8.8
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 182 bits (443), Expect = 3e-46
Identities = 98/210 (46%), Positives = 136/210 (64%), Gaps = 3/210 (1%)
Frame = +2
Query: 203 IDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREA 382
+++ + + + ++CT+GPASR+V +LEK++ GMNVAR NFSHG+HEYH ET+ N R+A
Sbjct: 13 LENDDARVPKTKLVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLRQA 72
Query: 383 EKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNA 562
+ + A+ LDTKGPEIRTG L+ G ++L KG+ +LT ++DY+ KG+
Sbjct: 73 MHN------TGVLCAVMLDTKGPEIRTGFLKDG--KPIKLTKGQ--ELTVTTDYEIKGDE 122
Query: 563 DTIYVDYKNITNVVKPGNRIFIDDGLISIICQSV--SADTLTCTIENGGMLGSRKGVNLP 736
+ I + YK + VKPGN I DG IS+ S A T+ C EN MLG RK NLP
Sbjct: 123 NMITMSYKKLPVDVKPGNVILCADGTISLTVLSCDPKAGTVRCRCENTAMLGERKNCNLP 182
Query: 737 GIPVDLPAVSEKDKSDXL-FGVXXGVDMIS 823
GI VDLP ++EKDK D L +GV +DMI+
Sbjct: 183 GIVVDLPTLTEKDKEDILGWGVPNDIDMIA 212
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 130 bits (314), Expect = 1e-30
Identities = 77/204 (37%), Positives = 118/204 (57%), Gaps = 8/204 (3%)
Frame = +2
Query: 227 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 406
R + I+CTIGP++ ++ K+ ETGMNVARMN SHG H+ H + I + K Y+AK
Sbjct: 89 RKTKIVCTIGPSTNTREMIWKLAETGMNVARMNMSHGDHQSHQKVI----DLVKEYNAKN 144
Query: 407 GSPFSLAIALDTK--GPEIRTGLLEG-----GGSAE-VELKKGETIKLTTSSDYQEKGNA 562
+AI LDTK + RT +++G G E + L++G+ T K
Sbjct: 145 TDGNVIAIMLDTKQMSCDDRTSVMQGPEVRSGDVPEPIMLEEGQEFNFTIKRGVSTK--- 201
Query: 563 DTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLGSRKGVNLPGI 742
DT+ V+Y + N V+ G+ + +D G++S+ +S +ADT+ C + +GG L SR+ +N+ G
Sbjct: 202 DTVSVNYDDFINDVEVGDILLVDGGMMSLAVKSKTADTVKCEVVDGGELKSRRHLNVRGK 261
Query: 743 PVDLPAVSEKDKSDXLFGVXXGVD 814
LP+++EKD D FGV GVD
Sbjct: 262 SATLPSITEKDWEDIKFGVENGVD 285
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 109 bits (261), Expect = 4e-24
Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 16/218 (7%)
Frame = +2
Query: 209 SKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEK 388
SK + R + I+CTIGP++ ++ K+ E GMNVAR+N SHG H H + I + K
Sbjct: 108 SKPNVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVI----DLVK 163
Query: 389 SYSAKLGSPFSLAIALDTKG-PEIRTGLLE-------GGGSAEVELKKGET---IKLTTS 535
Y+A+ +AI LDTK E +LE G E++ G+ I L T
Sbjct: 164 EYNAQTKDNV-IAIMLDTKSYTEYDVLMLECFFAVYASSGGIGPEVRSGDLPQPIMLETG 222
Query: 536 SDY-----QEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENG 700
++ + G + V+Y + N V+ G+ + +D G++S++ +S + D++ C + +G
Sbjct: 223 QEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVIDG 282
Query: 701 GMLGSRKGVNLPGIPVDLPAVSEKDKSDXLFGVXXGVD 814
G L SR+ +N+ G LP++++KD D FGV VD
Sbjct: 283 GELKSRRHLNVRGKSATLPSITDKDWDDIKFGVENQVD 320
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 103 bits (248), Expect = 1e-22
Identities = 60/133 (45%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
Frame = +2
Query: 434 LDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPG 613
L +GPEIRTG L+ G V+LKKG+ I T S+DY KG+ + I + YK + +KPG
Sbjct: 176 LKIQGPEIRTGFLKDG--KPVQLKKGQEI--TVSTDYSIKGDDNMISMSYKKLAVDLKPG 231
Query: 614 NRIFIDDGLISIICQSVSADT--LTCTIENGGMLGSRKGVNLPGIPVDLPAVSEKDKSDX 787
+ I DG I++ + + C EN MLG RK VNLPG+ VDLP ++EKDK D
Sbjct: 232 SVILCADGTITLTVLHCDKEQGLVRCRCENTAMLGERKNVNLPGVIVDLPTLTEKDKEDI 291
Query: 788 L-FGVXXGVDMIS 823
L +GV +DMI+
Sbjct: 292 LKWGVPNKIDMIA 304
Score = 74.9 bits (176), Expect = 8e-14
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +2
Query: 239 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 418
I+CT+GPASR+V ++ +++ GM VAR NFSHGSHEYH ET+ N R A +S +
Sbjct: 23 IVCTLGPASRSVEMIGRLLRAGMCVARFNFSHGSHEYHQETLDNLRAAMES------TGI 76
Query: 419 SLAIALDTKGPEIRTGLL 472
A+ LDTK + G+L
Sbjct: 77 LCAVMLDTKARDFVLGVL 94
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 99.5 bits (237), Expect = 3e-21
Identities = 56/129 (43%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
Frame = +2
Query: 446 GPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIF 625
GPEIRTG L+ G ++LK+G+ I +T DY KG+ + I + Y + +KPG+ I
Sbjct: 71 GPEIRTGFLKDG--KPIQLKQGKEITITI--DYSIKGDENLISMSYHKLAIDLKPGSTIL 126
Query: 626 IDDGLISIICQSVSADT--LTCTIENGGMLGSRKGVNLPGIPVDLPAVSEKDKSDXL-FG 796
DG I++ S + + C EN MLG RK VNLPG+ VDLP ++EKDK D L +G
Sbjct: 127 CADGTITLTVLSCDCEQGLVRCRCENSAMLGERKNVNLPGVIVDLPTLTEKDKVDILQWG 186
Query: 797 VXXGVDMIS 823
V +DMI+
Sbjct: 187 VPNKIDMIA 195
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 93.1 bits (221), Expect = 3e-19
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 10/208 (4%)
Frame = +2
Query: 230 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 409
++ I+ T+GP SR+V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRSVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKVAIKS-TKKL- 58
Query: 410 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKN 589
A+ LDT GPE++ + A + L++ T+ LT D ++ ++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEASISLEENGTVILT--PDQGQEASSQVLPINFAG 109
Query: 590 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 742
+ VKPG+ IF+ L + + + D + C I+N L GS ++ I
Sbjct: 110 LAKAVKPGDTIFVGQYLFTGSETTSVWLEVSQIKGDDVVCVIKNTATLAGSLFTLHCSQI 169
Query: 743 PVDLPAVSEKDKS-DXLFGVXXGVDMIS 823
+DLP +S++DK +G +D +S
Sbjct: 170 HIDLPTLSDEDKEVIRKWGAPNKIDFLS 197
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 91.5 bits (217), Expect = 8e-19
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Frame = +2
Query: 227 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 406
R + ++CT+GPA+ LE + GMNVAR+N HG E+H IR R +
Sbjct: 99 RRTKLVCTVGPATCGADELEALAVGGMNVARVNMCHGDREWHRGVIRAVRRLNEE----- 153
Query: 407 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYK 586
F++A+ +DT+G EI G L GG+A + + GE + S ++ TI+V+Y+
Sbjct: 154 -KGFAVAVMMDTEGSEIHMGDL--GGAAAAKAEDGEIWTFSVRS-FEAPPPERTIHVNYE 209
Query: 587 NITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLGSRKGVNL--PGIPVD--- 751
V+ G+ + +D G+ + C + G+L R + G V
Sbjct: 210 GFAEDVRVGDELLVDGGMARFEVVEKLGPDVKCRCTDPGLLLPRANLTFWRDGSIVRERN 269
Query: 752 --LPAVSEKDKSDXLFGVXXGVDMIS 823
LP +S KD D FG+ GVD I+
Sbjct: 270 AMLPTISSKDWLDIDFGISEGVDFIA 295
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 90.2 bits (214), Expect = 2e-18
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 10/208 (4%)
Frame = +2
Query: 230 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 409
++ I+ T+GP SR V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRAVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKS-TKKL- 58
Query: 410 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKN 589
A+ LDT GPE++ + A + L+ T+ LT D ++ +++ + +++
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEAAISLEANGTVVLT--PDQGQEASSELLPINFSG 109
Query: 590 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 742
+ +KPG IF+ L + + V D + C I+N L GS ++ I
Sbjct: 110 LAKALKPGATIFVGQYLFTGSETTSVWLEVSEVKGDDVVCVIKNSATLAGSLFTLHCSQI 169
Query: 743 PVDLPAVSEKDKS-DXLFGVXXGVDMIS 823
+DLP +S++DK +G +D +S
Sbjct: 170 HIDLPTLSDEDKEVIRRWGAPNKIDFLS 197
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 78.2 bits (184), Expect = 8e-15
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 10/208 (4%)
Frame = +2
Query: 230 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 409
L+ I+ T+GP S +V V+++ + GM VAR +FS YH ET+ N R+A ++ + KL
Sbjct: 29 LTKIVGTLGPNSHSVEVIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVN-KL- 86
Query: 410 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKN 589
+ LDT GPEI+ GG +ELK G + +T D + +++ + + +
Sbjct: 87 ----CPVMLDTLGPEIQVHNSTGG---PIELKAGNHVTIT--PDLSKAPSSEILPIKFGG 137
Query: 590 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 742
+ VK G+ +FI L + + S + + C + N L G +++
Sbjct: 138 LAKAVKKGDTLFIGQYLFTGSETTSSWLEVVETSGENVECLVTNTATLAGPMFTLHVSKA 197
Query: 743 PVDLPAVSEKDKS-DXLFGVXXGVDMIS 823
V LP +S+ DK +G+ VD+IS
Sbjct: 198 HVSLPTLSDYDKEVISTWGLHNSVDIIS 225
>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 36.3 bits (80), Expect = 0.033
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Frame = +2
Query: 533 SSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISI-ICQSVSADTLTCTIENGGML 709
+S ++ + T++V++ + + G+ + ID G+ + + + V D L C + G+L
Sbjct: 773 TSKRTDESHPFTMHVNFDKFSEDILVGDELVIDGGMATFEVIEKVGND-LRCKCTDPGLL 831
Query: 710 GSRKGVNL--PGIPVD----LPAVSEKDKSDXLFGVXXGVDMIS 823
R ++ G V+ LP +S KD +D FG+ GVD I+
Sbjct: 832 LPRAKLSFWRNGKLVERNFGLPTLSAKDWADIEFGIAEGVDCIA 875
>02_01_0510 + 3703715-3705040
Length = 441
Score = 30.3 bits (65), Expect = 2.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 411 HPSLWPSHWTLKD 449
HP LWP HW +KD
Sbjct: 192 HPFLWPDHWPVKD 204
>08_02_1064 -
24033941-24034127,24034432-24034476,24035355-24035421,
24035521-24035600,24035691-24035769,24035864-24035939
Length = 177
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 302 GMNVARMNFSHGSHEY--HAETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLE 475
G NV N +Y +AE IR R E+ ++ SP+ L L G E+ T +
Sbjct: 79 GRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEKSRDSSPWDLWYLLFQSGTEMTTEIEN 138
Query: 476 GGGSAEVELKKGETI 520
G E +KG +
Sbjct: 139 AGAEVAAEAEKGMAV 153
>07_01_0297 - 2156960-2157736
Length = 258
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -1
Query: 197 DRTYAGAGSRRWRLWAFQLHPRKPWLCSPINWINL 93
DR A RRWRL A+Q HP P + W+NL
Sbjct: 51 DRLRFRAVCRRWRLAAWQQHPLPP----ALPWLNL 81
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 483 PPPSKSPVLISGPLVSNAMAKEKGEPSL 400
PPP+ SP L S P+ S +++EK +L
Sbjct: 335 PPPNPSPSLASAPVYSPVLSREKVRDAL 362
>10_08_0625 + 19362303-19363853
Length = 516
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 485 SAEVELKK--GETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQ 658
+A E KK GET K T E DT+ +D K + + GNR DD +I + +
Sbjct: 256 NARREYKKHGGETTKTTNKETTLEHSYVDTL-LDIK----LPEDGNRALTDDEIIKLCSE 310
Query: 659 SVSADTLT 682
++A T T
Sbjct: 311 FLNAGTDT 318
>12_02_1084 -
25928373-25928426,25928551-25928652,25928913-25929039,
25929292-25930730,25931430-25931447
Length = 579
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 212 KSSYIRLSGIICTIGPASRNVAVLEK 289
K + IRL+ IIC P + VAVL+K
Sbjct: 481 KRNEIRLTNIICQFNPLVQQVAVLKK 506
>11_06_0513 + 24466131-24469487
Length = 1118
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/94 (25%), Positives = 43/94 (45%)
Frame = +2
Query: 125 MAFAGAVEKPTVANVGSQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETG 304
+++AG +AN QL+ + + I IRL + C+ P + LE + +G
Sbjct: 874 ISYAGETFPCWMANTNPQLKKLTQIRI------IRLINLKCSSLPPLGQLHQLETLEISG 927
Query: 305 MNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 406
MN + S E +A+T R+ ++ S+ L
Sbjct: 928 MNAIKNVSSELHGELNADTFRSLKKIVFSHMVNL 961
>09_02_0036 + 3217163-3217584,3217752-3218322
Length = 330
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -1
Query: 167 RWRLWAFQLHPR-KPWLCSPINWIN 96
RW+L+ F LH R K W S I +N
Sbjct: 7 RWKLFPFSLHERAKQWYTSTIGCVN 31
>07_01_0724 + 5529642-5531141
Length = 499
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 280 AREDDGDGNERGKDELLARFP*VPRRDHSQLSRGREELQ 396
AR+DDGDG+ RG+D A + + +R E+Q
Sbjct: 434 ARDDDGDGSFRGEDVAAAVRRVMAEEEGKVFARNAREMQ 472
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,457,138
Number of Sequences: 37544
Number of extensions: 459344
Number of successful extensions: 1603
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1586
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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