Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H22
(899 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical p... 265 3e-71
Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical pr... 265 3e-71
Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical pr... 265 3e-71
Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical pr... 265 3e-71
Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical pr... 237 8e-63
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 32 0.64
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 32 0.64
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 30 2.6
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 3.4
>Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical
protein F25H5.3d protein.
Length = 558
Score = 265 bits (649), Expect = 3e-71
Identities = 126/216 (58%), Positives = 159/216 (73%)
Frame = +2
Query: 173 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 352
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 56 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 115
Query: 353 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 532
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 116 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 171
Query: 533 SSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 712
+ E G A ++VDYKNI V+ G+R++IDDGLIS+I + + D + C++ENGGMLG
Sbjct: 172 DPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISLIVEELQTDAVICSVENGGMLG 231
Query: 713 SRKGVNLPGIPVDLPAVSEKDKSDXLFGVXXGVDMI 820
SRKGVNLPG VDLPAVSEKD D FGV GVD+I
Sbjct: 232 SRKGVNLPGTIVDLPAVSEKDCKDLQFGVEQGVDII 267
>Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical
protein F25H5.3c protein.
Length = 531
Score = 265 bits (649), Expect = 3e-71
Identities = 126/216 (58%), Positives = 159/216 (73%)
Frame = +2
Query: 173 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 352
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 29 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 88
Query: 353 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 532
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 89 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 144
Query: 533 SSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 712
+ E G A ++VDYKNI V+ G+R++IDDGLIS+I + + D + C++ENGGMLG
Sbjct: 145 DPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISLIVEELQTDAVICSVENGGMLG 204
Query: 713 SRKGVNLPGIPVDLPAVSEKDKSDXLFGVXXGVDMI 820
SRKGVNLPG VDLPAVSEKD D FGV GVD+I
Sbjct: 205 SRKGVNLPGTIVDLPAVSEKDCKDLQFGVEQGVDII 240
>Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical
protein F25H5.3b protein.
Length = 600
Score = 265 bits (649), Expect = 3e-71
Identities = 126/216 (58%), Positives = 159/216 (73%)
Frame = +2
Query: 173 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 352
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 98 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 157
Query: 353 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 532
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 158 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 213
Query: 533 SSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 712
+ E G A ++VDYKNI V+ G+R++IDDGLIS+I + + D + C++ENGGMLG
Sbjct: 214 DPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISLIVEELQTDAVICSVENGGMLG 273
Query: 713 SRKGVNLPGIPVDLPAVSEKDKSDXLFGVXXGVDMI 820
SRKGVNLPG VDLPAVSEKD D FGV GVD+I
Sbjct: 274 SRKGVNLPGTIVDLPAVSEKDCKDLQFGVEQGVDII 309
>Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical
protein F25H5.3a protein.
Length = 562
Score = 265 bits (649), Expect = 3e-71
Identities = 126/216 (58%), Positives = 159/216 (73%)
Frame = +2
Query: 173 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 352
+ ++H+C LDI +R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYH
Sbjct: 60 THMEHLCRLDIREAPHLVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYH 119
Query: 353 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 532
A TI N REA S+S K + IALDTKGPEIRTGLL GG SAE+EL +G +I+LTT
Sbjct: 120 AGTIANVREAADSFSDKR----VIGIALDTKGPEIRTGLLAGGASAEIELARGASIRLTT 175
Query: 533 SSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 712
+ E G A ++VDYKNI V+ G+R++IDDGLIS+I + + D + C++ENGGMLG
Sbjct: 176 DPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISLIVEELQTDAVICSVENGGMLG 235
Query: 713 SRKGVNLPGIPVDLPAVSEKDKSDXLFGVXXGVDMI 820
SRKGVNLPG VDLPAVSEKD D FGV GVD+I
Sbjct: 236 SRKGVNLPGTIVDLPAVSEKDCKDLQFGVEQGVDII 271
>Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical
protein ZK593.1 protein.
Length = 515
Score = 237 bits (580), Expect = 8e-63
Identities = 113/216 (52%), Positives = 151/216 (69%)
Frame = +2
Query: 173 SQLQHMCGLDIDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYH 352
+ + H+CGL I + R +G+ICTIGPA +V L KM+ TGMN+AR+NFSHG+HE H
Sbjct: 16 TNISHLCGLRISERPQKTRKTGVICTIGPACSDVETLRKMINTGMNIARLNFSHGTHEAH 75
Query: 353 AETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTT 532
A TI+ REA ++ +PF +AIALDTKGPEIRTG+ EV+L+ G++++++T
Sbjct: 76 AATIKTIREAAEN------APFPVAIALDTKGPEIRTGMF-ANNMKEVQLENGKSVRVST 128
Query: 533 SSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLG 712
+ + IY DY+N+ VV+PG+RI+IDDGLIS+I +S + CTIENGG LG
Sbjct: 129 DPSMEFAATSSHIYADYRNLPKVVQPGSRIYIDDGLISLIVESCEETAVICTIENGGALG 188
Query: 713 SRKGVNLPGIPVDLPAVSEKDKSDXLFGVXXGVDMI 820
+RKGVNLPG VDLPAV+ KD D LFGV GVD+I
Sbjct: 189 TRKGVNLPGTIVDLPAVTSKDIEDLLFGVEQGVDII 224
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 31.9 bits (69), Expect = 0.64
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 444 LVSNAMAKEKGEPSLAL*LFSASRQLRM-VSAWYSWEPCEKFILATFIPVSIIFS 283
L SNA KEKG SL + F+ +R A W P E FIL T I ++ S
Sbjct: 74 LSSNAPVKEKGPSSLFI--FAEDNIIRRNAKAIIEWGPFEYFILLTIIGNCVVLS 126
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 31.9 bits (69), Expect = 0.64
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 444 LVSNAMAKEKGEPSLAL*LFSASRQLRM-VSAWYSWEPCEKFILATFIPVSIIFS 283
L SNA KEKG SL + F+ +R A W P E FIL T I ++ S
Sbjct: 74 LSSNAPVKEKGPSSLFI--FAEDNIIRRNAKAIIEWGPFEYFILLTIIGNCVVLS 126
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 780 DLSFSETAGRSTGMPGRLTPFRDPSIPPFSM 688
D+ S +A S G L+PF DPS+P S+
Sbjct: 136 DVMLSASARPSRGQDAPLSPFSDPSVPQISL 166
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 780 DLSFSETAGRSTGMPGRLTPFRDPSIPPFSM 688
D+ S +A S G L+PF DPS+P S+
Sbjct: 136 DVMLSASARPSRGQDAPLSPFSDPSVPQISL 166
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 464 GLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRI 622
G+LE G S + ELK + K + D+ KG+ ++ D + + + P RI
Sbjct: 690 GVLEQGDSLDTELKMPKNKKRRSGGDHHHKGDENSDESDEEEEMDEIDPDLRI 742
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 367 ANGLCV--VLMGTVREVHPCHVHSRXXXXXXHSYITGCRSNSTDYSGETDVRRLGV-NVE 197
AN LC+ V+ G+ +E H + + R +GC N+ ++ D +RL V N++
Sbjct: 1784 ANPLCIQPVVKGSCQEAHLRYYYDRVTDSCRLFEYSGCDGNANNFGSLEDCQRLCVLNIQ 1843
Query: 196 T 194
+
Sbjct: 1844 S 1844
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,441,709
Number of Sequences: 27780
Number of extensions: 370938
Number of successful extensions: 1189
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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