Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H18
(850 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 59 2e-08
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 59 2e-08
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 59 2e-08
Y10260-1|CAA71309.1| 559|Homo sapiens EYA1A protein. 31 5.3
U90875-1|AAC51226.1| 468|Homo sapiens cytotoxic ligand TRAIL re... 31 5.3
BC121799-1|AAI21800.1| 592|Homo sapiens eyes absent homolog 1 (... 31 5.3
BC121798-1|AAI21799.1| 519|Homo sapiens EYA1 protein protein. 31 5.3
AJ000098-1|CAA03923.1| 592|Homo sapiens EYA1C protein. 31 5.3
AJ000097-1|CAA03922.1| 592|Homo sapiens EYA1B protein. 31 5.3
AF467247-1|AAL73437.1| 557|Homo sapiens EYA1D protein. 31 5.3
X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein. 31 7.0
D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein. 31 7.0
BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein. 31 7.0
BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa prot... 31 7.0
AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa prot... 31 7.0
AL157938-8|CAI41109.1| 1684|Homo sapiens nucleoporin 214kDa prot... 31 7.0
AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant... 31 7.0
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 59.3 bits (137), Expect = 2e-08
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +3
Query: 6 DRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCATVAFMDIKSASKAHNIEHVLD 185
++I EHFKRYGRV++VK+L + S GV A V F+DIKSA KAHN + +
Sbjct: 20 EKIIEHFKRYGRVESVKILPKRGS---------EGGVAAFVDFVDIKSAQKAHNSVNKMG 70
Query: 186 ERTLTTEYYE 215
+R L T+Y E
Sbjct: 71 DRDLRTDYNE 80
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 59.3 bits (137), Expect = 2e-08
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +3
Query: 6 DRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCATVAFMDIKSASKAHNIEHVLD 185
++I EHFKRYGRV++VK+L + S GV A V F+DIKSA KAHN + +
Sbjct: 20 EKIIEHFKRYGRVESVKILPKRGS---------EGGVAAFVDFVDIKSAQKAHNSVNKMG 70
Query: 186 ERTLTTEYYE 215
+R L T+Y E
Sbjct: 71 DRDLRTDYNE 80
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 59.3 bits (137), Expect = 2e-08
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +3
Query: 6 DRIREHFKRYGRVQNVKLLGRTESVPTGASVSGNSGVCATVAFMDIKSASKAHNIEHVLD 185
++I EHFKRYGRV++VK+L + S GV A V F+DIKSA KAHN + +
Sbjct: 20 EKIIEHFKRYGRVESVKILPKRGS---------EGGVAAFVDFVDIKSAQKAHNSVNKMG 70
Query: 186 ERTLTTEYYE 215
+R L T+Y E
Sbjct: 71 DRDLRTDYNE 80
>Y10260-1|CAA71309.1| 559|Homo sapiens EYA1A protein.
Length = 559
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 346 TGVEESPATTTCPLAASVAAPATWRGTNDSATEFCRRGSTPAAYGRYQRNNSTAPYSTPP 525
+G+ T +++ +P+T DS ++ RRGS + GR +RNN+ +P P
Sbjct: 230 SGITSQAVTDPTAEYSTIHSPST--PIKDSDSDRLRRGSDGKSRGRGRRNNNPSP--PPD 285
Query: 526 STVER 540
S +ER
Sbjct: 286 SDLER 290
>U90875-1|AAC51226.1| 468|Homo sapiens cytotoxic ligand TRAIL
receptor protein.
Length = 468
Score = 31.1 bits (67), Expect = 5.3
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 355 EESPATTTCPLAASVAAPATWRGTNDSATEFCRRGSTPAAYGRYQRNNSTAPYS 516
E SP TTT A P T+R ND++ E CR+ ST G + + T P+S
Sbjct: 176 ERSPCTTTRNTACQ-CKPGTFR--NDNSAEMCRKCSTGCPRGMVKVKDCT-PWS 225
>BC121799-1|AAI21800.1| 592|Homo sapiens eyes absent homolog 1
(Drosophila) protein.
Length = 592
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 346 TGVEESPATTTCPLAASVAAPATWRGTNDSATEFCRRGSTPAAYGRYQRNNSTAPYSTPP 525
+G+ T +++ +P+T DS ++ RRGS + GR +RNN+ +P P
Sbjct: 263 SGITSQAVTDPTAEYSTIHSPST--PIKDSDSDRLRRGSDGKSRGRGRRNNNPSP--PPD 318
Query: 526 STVER 540
S +ER
Sbjct: 319 SDLER 323
>BC121798-1|AAI21799.1| 519|Homo sapiens EYA1 protein protein.
Length = 519
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 346 TGVEESPATTTCPLAASVAAPATWRGTNDSATEFCRRGSTPAAYGRYQRNNSTAPYSTPP 525
+G+ T +++ +P+T DS ++ RRGS + GR +RNN+ +P P
Sbjct: 190 SGITSQAVTDPTAEYSTIHSPST--PIKDSDSDRLRRGSDGKSRGRGRRNNNPSP--PPD 245
Query: 526 STVER 540
S +ER
Sbjct: 246 SDLER 250
>AJ000098-1|CAA03923.1| 592|Homo sapiens EYA1C protein.
Length = 592
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 346 TGVEESPATTTCPLAASVAAPATWRGTNDSATEFCRRGSTPAAYGRYQRNNSTAPYSTPP 525
+G+ T +++ +P+T DS ++ RRGS + GR +RNN+ +P P
Sbjct: 263 SGITSQAVTDPTAEYSTIHSPST--PIKDSDSDRLRRGSDGKSRGRGRRNNNPSP--PPD 318
Query: 526 STVER 540
S +ER
Sbjct: 319 SDLER 323
>AJ000097-1|CAA03922.1| 592|Homo sapiens EYA1B protein.
Length = 592
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 346 TGVEESPATTTCPLAASVAAPATWRGTNDSATEFCRRGSTPAAYGRYQRNNSTAPYSTPP 525
+G+ T +++ +P+T DS ++ RRGS + GR +RNN+ +P P
Sbjct: 263 SGITSQAVTDPTAEYSTIHSPST--PIKDSDSDRLRRGSDGKSRGRGRRNNNPSP--PPD 318
Query: 526 STVER 540
S +ER
Sbjct: 319 SDLER 323
>AF467247-1|AAL73437.1| 557|Homo sapiens EYA1D protein.
Length = 557
Score = 31.1 bits (67), Expect = 5.3
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 346 TGVEESPATTTCPLAASVAAPATWRGTNDSATEFCRRGSTPAAYGRYQRNNSTAPYSTPP 525
+G+ T +++ +P+T DS ++ RRGS + GR +RNN+ +P P
Sbjct: 258 SGITSQAVTDPTAEYSTIHSPST--PIKDSDSDRLRRGSDGKSRGRGRRNNNPSP--PPD 313
Query: 526 STVER 540
S +ER
Sbjct: 314 SDLER 318
>X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein.
Length = 2090
Score = 30.7 bits (66), Expect = 7.0
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +1
Query: 319 PASVSRYHITGVEESPATTTCPLAASVAAPATWRGTNDSAT---EFCRRGSTPAAYGRYQ 489
P S T V AT+T A + P T G++ + G T ++G Q
Sbjct: 1386 PPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGS-Q 1444
Query: 490 RNNSTAPYSTPPSTVERT 543
+ NST P S PP T T
Sbjct: 1445 QTNSTVPPSAPPPTTAAT 1462
>D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein.
Length = 2093
Score = 30.7 bits (66), Expect = 7.0
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +1
Query: 319 PASVSRYHITGVEESPATTTCPLAASVAAPATWRGTNDSAT---EFCRRGSTPAAYGRYQ 489
P S T V AT+T A + P T G++ + G T ++G Q
Sbjct: 1365 PPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGS-Q 1423
Query: 490 RNNSTAPYSTPPSTVERT 543
+ NST P S PP T T
Sbjct: 1424 QTNSTVPPSAPPPTTAAT 1441
>BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein.
Length = 2080
Score = 30.7 bits (66), Expect = 7.0
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +1
Query: 319 PASVSRYHITGVEESPATTTCPLAASVAAPATWRGTNDSAT---EFCRRGSTPAAYGRYQ 489
P S T V AT+T A + P T G++ + G T ++G Q
Sbjct: 1376 PPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGS-Q 1434
Query: 490 RNNSTAPYSTPPSTVERT 543
+ NST P S PP T T
Sbjct: 1435 QTNSTVPPSAPPPTTAAT 1452
>BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa protein.
Length = 2090
Score = 30.7 bits (66), Expect = 7.0
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +1
Query: 319 PASVSRYHITGVEESPATTTCPLAASVAAPATWRGTNDSAT---EFCRRGSTPAAYGRYQ 489
P S T V AT+T A + P T G++ + G T ++G Q
Sbjct: 1386 PPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGS-Q 1444
Query: 490 RNNSTAPYSTPPSTVERT 543
+ NST P S PP T T
Sbjct: 1445 QTNSTVPPSAPPPTTAAT 1462
>AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa protein.
Length = 2090
Score = 30.7 bits (66), Expect = 7.0
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +1
Query: 319 PASVSRYHITGVEESPATTTCPLAASVAAPATWRGTNDSAT---EFCRRGSTPAAYGRYQ 489
P S T V AT+T A + P T G++ + G T ++G Q
Sbjct: 1386 PPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGS-Q 1444
Query: 490 RNNSTAPYSTPPSTVERT 543
+ NST P S PP T T
Sbjct: 1445 QTNSTVPPSAPPPTTAAT 1462
>AL157938-8|CAI41109.1| 1684|Homo sapiens nucleoporin 214kDa protein.
Length = 1684
Score = 30.7 bits (66), Expect = 7.0
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +1
Query: 319 PASVSRYHITGVEESPATTTCPLAASVAAPATWRGTNDSAT---EFCRRGSTPAAYGRYQ 489
P S T V AT+T A + P T G++ + G T ++G Q
Sbjct: 980 PPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGS-Q 1038
Query: 490 RNNSTAPYSTPPSTVERT 543
+ NST P S PP T T
Sbjct: 1039 QTNSTVPPSAPPPTTAAT 1056
>AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant 1
protein.
Length = 2091
Score = 30.7 bits (66), Expect = 7.0
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +1
Query: 319 PASVSRYHITGVEESPATTTCPLAASVAAPATWRGTNDSAT---EFCRRGSTPAAYGRYQ 489
P S T V AT+T A + P T G++ + G T ++G Q
Sbjct: 1387 PPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGS-Q 1445
Query: 490 RNNSTAPYSTPPSTVERT 543
+ NST P S PP T T
Sbjct: 1446 QTNSTVPPSAPPPTTAAT 1463
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,441,278
Number of Sequences: 237096
Number of extensions: 2472346
Number of successful extensions: 11143
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11140
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -