Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP03_FL5_H16
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980...    29   6.7  
07_03_1160 - 24430240-24431268                                         29   6.7  
08_02_0732 + 20521459-20522323,20522404-20522480,20523251-205232...    28   8.9  
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420     28   8.9  

>11_04_0415 -
           17395988-17396161,17397349-17397444,17397489-17398026,
           17398106-17398422
          Length = 374

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -1

Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXPXPRWGSR 807
           P   G G P G G G P   G G P    GS+
Sbjct: 24  PRGFGGGGPRGFGGGGPRGFGGGGPRGFGGSK 55


>07_03_1160 - 24430240-24431268
          Length = 342

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 799 PMXREPQRGXGXPXPAAEGXPXPXPKGXPXP 891
           P   EP R    P P ++G P P P   P P
Sbjct: 148 PNTYEPSRPDQPPQPISDGPPLPNPNVPPKP 178


>08_02_0732 +
           20521459-20522323,20522404-20522480,20523251-20523296,
           20523482-20523713,20524244-20524439
          Length = 471

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 223 STGPLHAILAGTMRGSAHARA 161
           STG LH +LA T+RG A A A
Sbjct: 196 STGRLHGVLADTLRGYAGAAA 216


>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
          Length = 433

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP 828
           P   G G P G G G P + G G P
Sbjct: 16  PRGGGGGGPRGCGGGGPRSGGGGGP 40


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,083,308
Number of Sequences: 37544
Number of extensions: 300814
Number of successful extensions: 1237
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)