Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H16
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC151221-1|AAI51222.1| 1235|Homo sapiens TAO kinase 2 protein. 33 1.9
BC142663-1|AAI42664.1| 1235|Homo sapiens TAO kinase 2 protein. 33 1.9
BC051798-1|AAH51798.1| 1426|Homo sapiens TAOK2 protein protein. 33 1.9
BC015204-1|AAH15204.1| 762|Homo sapiens Unknown (protein for IM... 33 1.9
AL137701-1|CAB70882.1| 1062|Homo sapiens hypothetical protein pr... 33 1.9
AF263313-1|AAG38503.1| 1049|Homo sapiens STE20-like kinase protein. 33 1.9
AF061943-1|AAD45616.1| 1235|Homo sapiens prostate derived STE20-... 33 1.9
AB020688-1|BAA74904.2| 1064|Homo sapiens KIAA0881 protein protein. 33 1.9
S83341-1|AAB50777.1| 81|Homo sapiens prion protein protein. 32 3.3
S80539-1|AAB21334.1| 97|Homo sapiens PrP amyloid protein. 32 3.3
S79978-1|AAB35416.1| 89|Homo sapiens prion protein protein. 32 3.3
M81930-1|AAB59443.1| 233|Homo sapiens prion protein protein. 32 3.3
M13899-1|AAA60182.1| 253|Homo sapiens prion protein protein. 32 3.3
M13667-1|AAA19664.1| 245|Homo sapiens PRNP protein. 32 3.3
EF139172-1|ABL75508.1| 253|Homo sapiens prion protein protein. 32 3.3
D00015-1|BAA00011.1| 245|Homo sapiens prion protein protein. 32 3.3
DQ408531-1|ABD63004.1| 253|Homo sapiens prion protein PrP protein. 32 3.3
CR542072-1|CAG46869.1| 253|Homo sapiens PRNP protein. 32 3.3
CR542039-1|CAG46836.1| 253|Homo sapiens PRNP protein. 32 3.3
BT019496-1|AAV38303.1| 253|Homo sapiens prion protein (p27-30) ... 32 3.3
BC022532-1|AAH22532.1| 253|Homo sapiens prion protein (p27-30) ... 32 3.3
BC012844-1|AAH12844.1| 253|Homo sapiens prion protein (p27-30) ... 32 3.3
AY569456-1|AAS80162.1| 253|Homo sapiens prion protein protein. 32 3.3
AY458651-1|AAR21603.1| 277|Homo sapiens prion protein protein. 32 3.3
AY219883-1|AAO83636.1| 246|Homo sapiens prion protein protein. 32 3.3
AY008282-1|AAG21693.1| 253|Homo sapiens prion protein protein. 32 3.3
AL133396-4|CAB75503.1| 253|Homo sapiens prion protein (p27-30) ... 32 3.3
AL133396-3|CAM27320.1| 249|Homo sapiens prion protein (p27-30) ... 32 3.3
AL133396-2|CAI19053.1| 217|Homo sapiens prion protein (p27-30) ... 32 3.3
AF085477-1|AAC62750.2| 285|Homo sapiens prion protein precursor... 32 3.3
AF076976-1|AAD46098.1| 253|Homo sapiens prion protein protein. 32 3.3
AF030575-1|AAC05365.1| 246|Homo sapiens prion protein variant p... 32 3.3
>BC151221-1|AAI51222.1| 1235|Homo sapiens TAO kinase 2 protein.
Length = 1235
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 639 PVAEQEQFLLQQVERPEQFRLP--AGLLVRSRQPGEAHCRQGARRRL 505
P E+ ++LL+Q E+ +Q + AGLL R RQ E CRQ R+ L
Sbjct: 605 PKREKAEWLLRQKEQLQQCQAEEEAGLLRRQRQYFELQCRQYKRKML 651
>BC142663-1|AAI42664.1| 1235|Homo sapiens TAO kinase 2 protein.
Length = 1235
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 639 PVAEQEQFLLQQVERPEQFRLP--AGLLVRSRQPGEAHCRQGARRRL 505
P E+ ++LL+Q E+ +Q + AGLL R RQ E CRQ R+ L
Sbjct: 605 PKREKAEWLLRQKEQLQQCQAEEEAGLLRRQRQYFELQCRQYKRKML 651
>BC051798-1|AAH51798.1| 1426|Homo sapiens TAOK2 protein protein.
Length = 1426
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 639 PVAEQEQFLLQQVERPEQFRLP--AGLLVRSRQPGEAHCRQGARRRL 505
P E+ ++LL+Q E+ +Q + AGLL R RQ E CRQ R+ L
Sbjct: 796 PKREKAEWLLRQKEQLQQCQAEEEAGLLRRQRQYFELQCRQYKRKML 842
>BC015204-1|AAH15204.1| 762|Homo sapiens Unknown (protein for
IMAGE:3878048) protein.
Length = 762
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 639 PVAEQEQFLLQQVERPEQFRLP--AGLLVRSRQPGEAHCRQGARRRL 505
P E+ ++LL+Q E+ +Q + AGLL R RQ E CRQ R+ L
Sbjct: 605 PKREKAEWLLRQKEQLQQCQAEEEAGLLRRQRQYFELQCRQYKRKML 651
>AL137701-1|CAB70882.1| 1062|Homo sapiens hypothetical protein
protein.
Length = 1062
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 639 PVAEQEQFLLQQVERPEQFRLP--AGLLVRSRQPGEAHCRQGARRRL 505
P E+ ++LL+Q E+ +Q + AGLL R RQ E CRQ R+ L
Sbjct: 432 PKREKAEWLLRQKEQLQQCQAEEEAGLLRRQRQYFELQCRQYKRKML 478
>AF263313-1|AAG38503.1| 1049|Homo sapiens STE20-like kinase protein.
Length = 1049
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 639 PVAEQEQFLLQQVERPEQFRLP--AGLLVRSRQPGEAHCRQGARRRL 505
P E+ ++LL+Q E+ +Q + AGLL R RQ E CRQ R+ L
Sbjct: 605 PKREKAEWLLRQKEQLQQCQAEEEAGLLRRQRQYFELQCRQYKRKML 651
>AF061943-1|AAD45616.1| 1235|Homo sapiens prostate derived
STE20-like kinase PSK protein.
Length = 1235
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 639 PVAEQEQFLLQQVERPEQFRLP--AGLLVRSRQPGEAHCRQGARRRL 505
P E+ ++LL+Q E+ +Q + AGLL R RQ E CRQ R+ L
Sbjct: 605 PKREKAEWLLRQKEQLQQCQAEEEAGLLRRQRQYFELQCRQYKRKML 651
>AB020688-1|BAA74904.2| 1064|Homo sapiens KIAA0881 protein protein.
Length = 1064
Score = 32.7 bits (71), Expect = 1.9
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -3
Query: 639 PVAEQEQFLLQQVERPEQFRLP--AGLLVRSRQPGEAHCRQGARRRL 505
P E+ ++LL+Q E+ +Q + AGLL R RQ E CRQ R+ L
Sbjct: 620 PKREKAEWLLRQKEQLQQCQAEEEAGLLRRQRQYFELQCRQYKRKML 666
>S83341-1|AAB50777.1| 81|Homo sapiens prion protein protein.
Length = 81
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 1 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 39
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 18 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 55
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 34 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 71
>S80539-1|AAB21334.1| 97|Homo sapiens PrP amyloid protein.
Length = 97
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 1 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 39
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 18 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 55
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 34 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 71
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 50 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 87
>S79978-1|AAB35416.1| 89|Homo sapiens prion protein protein.
Length = 89
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 1 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 39
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 18 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 55
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 34 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 71
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 50 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 87
>M81930-1|AAB59443.1| 233|Homo sapiens prion protein protein.
Length = 233
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 44 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 82
>M13899-1|AAA60182.1| 253|Homo sapiens prion protein protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>M13667-1|AAA19664.1| 245|Homo sapiens PRNP protein.
Length = 245
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 44 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 82
>EF139172-1|ABL75508.1| 253|Homo sapiens prion protein protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>D00015-1|BAA00011.1| 245|Homo sapiens prion protein protein.
Length = 245
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 44 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 82
>DQ408531-1|ABD63004.1| 253|Homo sapiens prion protein PrP protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>CR542072-1|CAG46869.1| 253|Homo sapiens PRNP protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>CR542039-1|CAG46836.1| 253|Homo sapiens PRNP protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>BT019496-1|AAV38303.1| 253|Homo sapiens prion protein (p27-30)
(Creutzfeld-Jakob disease, Gerstmann-Strausler-Scheinker
protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>BC022532-1|AAH22532.1| 253|Homo sapiens prion protein (p27-30)
(Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinke
protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>BC012844-1|AAH12844.1| 253|Homo sapiens prion protein (p27-30)
(Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinke
protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>AY569456-1|AAS80162.1| 253|Homo sapiens prion protein protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>AY458651-1|AAR21603.1| 277|Homo sapiens prion protein protein.
Length = 277
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 68 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 105
>AY219883-1|AAO83636.1| 246|Homo sapiens prion protein protein.
Length = 246
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 44 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 82
>AY008282-1|AAG21693.1| 253|Homo sapiens prion protein protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>AL133396-4|CAB75503.1| 253|Homo sapiens prion protein (p27-30)
(Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinke
protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>AL133396-3|CAM27320.1| 249|Homo sapiens prion protein (p27-30)
(Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinke
protein.
Length = 249
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>AL133396-2|CAI19053.1| 217|Homo sapiens prion protein (p27-30)
(Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinke
protein.
Length = 217
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>AF085477-1|AAC62750.2| 285|Homo sapiens prion protein precursor
protein.
Length = 285
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 68 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 105
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -1
Query: 902 PSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 84 PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 121
>AF076976-1|AAD46098.1| 253|Homo sapiens prion protein protein.
Length = 253
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 51 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 89
>AF030575-1|AAC05365.1| 246|Homo sapiens prion protein variant
protein.
Length = 246
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -1
Query: 905 PPSAXGXGXPXGXGXGXPSAAGXGXP-XPRWGSRXIGXW 792
P G G P G G G P G G P WG G W
Sbjct: 44 PQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGW 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,081,917
Number of Sequences: 237096
Number of extensions: 1599886
Number of successful extensions: 4808
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4730
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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