BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H14
(840 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406 36 0.030
02_01_0384 - 2781362-2782299,2782320-2782428 35 0.070
10_08_0938 + 21693629-21694360,21694558-21694613,21694836-21694869 33 0.28
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 32 0.49
01_06_1529 - 38016208-38017296 32 0.49
01_06_0650 + 30872350-30872736,30873388-30873639,30873723-308738... 32 0.49
04_04_0085 + 22624918-22625035,22625225-22625421,22625460-22625597 32 0.65
12_02_1239 - 27275110-27275445 31 0.86
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 31 0.86
08_01_0311 - 2753062-2753232,2753340-2753381,2754490-2754667,275... 31 1.1
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 31 1.1
12_02_0634 + 21416205-21416954 31 1.5
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 31 1.5
04_03_0672 + 18559984-18559986,18560096-18560569,18560666-185608... 31 1.5
01_06_0668 + 31058497-31059510,31059609-31059676,31060189-310602... 31 1.5
11_06_0368 + 22756988-22758205 30 2.0
07_03_1783 + 29480987-29481165,29481526-29481685,29481767-294818... 30 2.0
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 30 2.0
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733... 30 2.6
01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126... 30 2.6
11_06_0610 - 25449085-25453284 29 4.6
07_03_1257 - 25241194-25242018 29 4.6
07_01_0702 + 5288588-5288889,5289257-5289407,5289543-5289725,529... 29 4.6
05_05_0335 - 24164714-24165574 29 4.6
05_05_0210 - 23285241-23285338,23286297-23286447,23286660-232867... 29 4.6
04_01_0034 - 401208-402923 29 4.6
02_05_1337 - 35780076-35780290,35780377-35780408,35780490-357805... 29 4.6
09_02_0202 + 5735613-5736170 29 6.1
05_07_0035 - 27221338-27221433,27221510-27221599,27222056-272221... 29 6.1
04_04_0844 - 28637393-28638118,28638206-28638283,28638431-286386... 29 6.1
10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998 28 8.1
09_04_0506 - 18188785-18190599 28 8.1
09_03_0126 + 12547695-12548193,12549266-12549285 28 8.1
08_02_1334 - 26224546-26225337 28 8.1
08_02_0484 + 17665714-17666877 28 8.1
07_01_0608 + 4515709-4515951,4516085-4516678 28 8.1
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 28 8.1
05_03_0622 - 16293341-16293350,16293783-16294063,16294343-162944... 28 8.1
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 28 8.1
03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600 28 8.1
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 28 8.1
02_05_0265 + 27267361-27268494 28 8.1
01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872 28 8.1
>12_02_1063 - 25769821-25770365,25770513-25771010,25771394-25771406
Length = 351
Score = 36.3 bits (80), Expect = 0.030
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +3
Query: 210 DGGNFRPSLPTHRPGNGLRKGRPAQAFGRSPGDSEDSSRGNFVSPX*RIALDPLGRERRS 389
DGG R P R G GLR RP + G DS S G + L R +RS
Sbjct: 54 DGGGLRGRWPG-RDGGGLRGRRPGRDGGNLGADSVGGSLGAMAAGTDNGGLGATARRKRS 112
Query: 390 DP--SPTEAFPKPRTN 431
SP A P P TN
Sbjct: 113 ASARSPPPARPPPATN 128
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 35.1 bits (77), Expect = 0.070
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 167 PLSARPVRPARDAKRWREFSPIAPNPPARKWTPERTTGP 283
PL R +A+R R +SPI+ +PPAR W + + P
Sbjct: 269 PLGGGGGRCVEEARRRRRWSPISSSPPARLWASQPSAAP 307
>10_08_0938 + 21693629-21694360,21694558-21694613,21694836-21694869
Length = 273
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 280 PRPSVAAQGTPRIRPEETSSPPXDGSLWTPSAAKEGQ 390
P PS + GT R+RP S PP LW ++A Q
Sbjct: 28 PSPSPSPPGTGRVRPAPVSLPPRPPLLWAAASAAPRQ 64
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 126 PLDSQYHVGGDISPHYQHARSVPQGTPSDGGNFRPSLPTHR--PGNGLRKGRPAQAFGRS 299
P+ S+ GG + H +RS+ + G R P H P L R + A RS
Sbjct: 723 PVRSRSPAGGKLRSHGDRSRSMSRSRSLSGSRSRSPPPIHNRSPLASLSPKRESNAKSRS 782
Query: 300 PGDSEDSSRG 329
P S + +G
Sbjct: 783 PSASSEGKKG 792
>01_06_1529 - 38016208-38017296
Length = 362
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -1
Query: 291 RRPGPVVLSGVHF---RAGGLGAMGENSRHRLASLAGRTGRADNGGRCPPRHDIGYLVGS 121
RR P++ SGV + R GG G GE R + + A +G D+GG D+G+ G
Sbjct: 42 RRRLPLITSGVLYQEGRGGGGGGGGEGRRRQAYTYACASGGGDHGGGV-AEADMGFFPGH 100
Query: 120 SRVT 109
T
Sbjct: 101 ETST 104
>01_06_0650 +
30872350-30872736,30873388-30873639,30873723-30873818,
30874005-30874173,30874452-30874552,30874910-30875002,
30876018-30876089,30876509-30876628,30876709-30876759,
30877621-30877809,30878099-30878266
Length = 565
Score = 32.3 bits (70), Expect = 0.49
Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Frame = +2
Query: 164 PPLSARPVRPARDAKRWREFSPI------APNPPARKWTPERTTGPGLRSQPRGLRGFVQ 325
PPL A P WR F+P AP PP P G+RS RG RG
Sbjct: 31 PPLPA--AAPTASLLSWRGFTPSSEPSRSAPPPPPLPMPPFAGFLAGIRSFRRGRRGQSA 88
Query: 326 RKLRLPRLTDRSGPPRPRK 382
+ P+ S PP P++
Sbjct: 89 ARRAQPQDPIPSPPPAPKE 107
>04_04_0085 + 22624918-22625035,22625225-22625421,22625460-22625597
Length = 150
Score = 31.9 bits (69), Expect = 0.65
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -3
Query: 499 SLLAVLILFGFIY*FGRGSNSGSFV-LGFGNASVGLGSDLLSRPRGSRAIRQXGETKFPL 323
+LL VL++F + + F G S S V LG G+ S + + RGS RQ G+ ++
Sbjct: 23 NLLMVLLVFFYFWRFFSGVYSASDVGLGLGDTSGNGKAVAVEAARGSAVARQSGQVEW-- 80
Query: 322 DESSESPGLRPKAWAGRPFRSP 257
S +P AW P +P
Sbjct: 81 -RRSHAP--TQSAWNVEPVAAP 99
>12_02_1239 - 27275110-27275445
Length = 111
Score = 31.5 bits (68), Expect = 0.86
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Frame = +2
Query: 242 PPARKWTPERTTGPG------LRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESD 403
PPA+ W + PG R +PR R VQR LT PP PR+ V
Sbjct: 23 PPAKPWRASPSAAPGPAPPKVYRVEPREFRDLVQR------LTGAPAPPPPRQPVAPAQP 76
Query: 404 RSISEAQDKRPRIGP 448
+ A D+ P
Sbjct: 77 VPVRPAVDEAQLYAP 91
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.5 bits (68), Expect = 0.86
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 192 PQGTPSDGGNFRPSLPTHRPGNGLRKGRPA 281
P TPS GG + PS P + PG G P+
Sbjct: 1541 PGYTPSSGGGYSPSSPVYSPGPGYSPTSPS 1570
>08_01_0311 -
2753062-2753232,2753340-2753381,2754490-2754667,
2755021-2755118,2755964-2756098,2756280-2756444,
2756529-2756693,2757082-2757299,2758508-2758811
Length = 491
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 261 VHFRAGGLGAMGENSRHRLASLAGRTGRAD 172
V + G+G MG H LA LAG GRA+
Sbjct: 14 VRYGIVGVGMMGREHLHNLAHLAGEVGRAE 43
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Frame = -1
Query: 345 RGRRSFLW------TNPRSPLGCDRRPGPVVLSGVHFRAGGLGA--------MGENSRHR 208
R + FLW +NP S C R G SG GG+G G+N R
Sbjct: 132 RNKEIFLWRWPTLGSNPGSATACGRWLGAGDSSGA---GGGVGRERWIWDSLQGKNEVLR 188
Query: 207 LASLAGRTGRADNGGRCPPRHDIGYLVGSSRVTRHQCLIKLQ 82
A+ +GR G A+N + D + + RH+ L+KL+
Sbjct: 189 GATRSGRKGNAENWSSQGDKDDFYNELNTISEARHKNLVKLE 230
>12_02_0634 + 21416205-21416954
Length = 249
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = -2
Query: 341 GDEVSSGRILGVPWAATEGLGRSSFPESISGPVGWERWAKIPAIAWRPLRDGPGVLIMGG 162
G GR LG AT G P G GW RW + WR R G L GG
Sbjct: 175 GGAAGGGR-LGEKRRATAGRQLRGSPRETEGKPGWRRWRR----RWRRRRRGRTTLRRGG 229
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +3
Query: 207 SDGGNFRPSLPTHRPGNGLRKGRPAQAFGRSPGDSEDSSRGNFVSPX*RIALDPLGRERR 386
SD + +P+ P NGL+KG+PA + S D E +P + ++ ++
Sbjct: 118 SDDEDAKPADPV--ANNGLKKGKPASSDSESDSDDEMDEDEKPAAPVKKTSVTAQKKKDD 175
Query: 387 SDPSPTEA 410
SD S +E+
Sbjct: 176 SDSSESES 183
>04_03_0672 +
18559984-18559986,18560096-18560569,18560666-18560836,
18561494-18561640
Length = 264
Score = 30.7 bits (66), Expect = 1.5
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 6/113 (5%)
Frame = +3
Query: 129 LDSQYHVGGDISPHYQHARSVPQGTPSDGGNFRPSLPTHRPGNGLRKGRPAQAFG---RS 299
L Q VGG I + + G+ S PS P HR R A + G +
Sbjct: 85 LSQQREVGGGIGSAPRSPYRMVHGSASPAQPNNPSKPKHRSSGMQTPERRASSEGHGQHT 144
Query: 300 PGDSEDSSRG-NFVSPX*RIALDPLGRERRSDPSPTEAFPK--PRTNDPELDP 449
P S D G + +P +A+ P G + + E F R D +L P
Sbjct: 145 PRRSRDKQGGRGYDAPEDDVAVPPFGEWDEGNAASGEKFTGIFNRVRDDKLSP 197
>01_06_0668 +
31058497-31059510,31059609-31059676,31060189-31060270,
31060339-31060431,31060516-31060668,31060900-31060968,
31061091-31061184,31061594-31061677,31062133-31062221,
31062340-31062456,31062567-31062707,31062823-31063005
Length = 728
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -2
Query: 302 WAATEGLGRSSFPESISGPVGWERWAKIPAIAWRPLRDGPGVL-IMGGDVPP 150
WA++EG R S PE+++ + IPA+ RDG +L ++GGDV P
Sbjct: 266 WASSEGCERVSIPEAMA----TDDMPGIPALPVSG-RDGEAILQLIGGDVAP 312
>11_06_0368 + 22756988-22758205
Length = 405
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 384 RSDPSPTEAFPKPRTNDPELDPRPNQ*MKPKRMRTA 491
+ P P PKP+ P+ +P PN P+R +TA
Sbjct: 8 KDKPLPKPKPPKPKPKPPKPEPEPNTRSAPERDQTA 43
>07_03_1783 +
29480987-29481165,29481526-29481685,29481767-29481862,
29481948-29482062,29482175-29482337,29482536-29482707,
29483924-29484013,29484137-29484598,29484675-29485268,
29485486-29485554,29485810-29485902,29486432-29486677,
29487277-29487417,29487748-29487828,29487911-29487973,
29488059-29488166,29488303-29488383,29488474-29488521,
29488979-29489053,29489973-29490068,29490156-29490236,
29490295-29490402,29490989-29491033,29491119-29491202,
29491379-29491482,29491581-29491728
Length = 1233
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +3
Query: 162 SPHYQHARSVPQGTPSDGGNFRPSLPTHRPGNGLRKGRPAQAFGRSPGDS 311
S HA + QGT GG+F SLP GL + ++ RSP S
Sbjct: 558 SSEASHASTELQGTQEHGGSFISSLPADNSSAGLSLAQSSET--RSPSSS 605
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 274 DRPRPSVAAQGTPRIRPEETSSPPXDGSLWTPSAAKEG---QIRVRPKHFRSPGQTTPNW 444
D P PS AA I P +S PP +++T + G + R P+ + Q+ +
Sbjct: 87 DAPAPSPAAASDSSIPPSSSSPPPVSAAVFTTRHQELGNPRRGRPTPQVLKQVWQSGERY 146
Query: 445 TLVQINK*SR 474
TL Q SR
Sbjct: 147 TLDQFESKSR 156
>07_03_1632 +
28271559-28271645,28272641-28272713,28273030-28273361,
28273455-28274791,28275451-28275848,28275963-28277644,
28277727-28277884,28278645-28278802,28279110-28279270,
28279826-28280014
Length = 1524
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -3
Query: 412 NASVGLGSDLLSRPRGSRAIRQXGETKFPLDESSESPGLRPKAWAGRPFRSPFP-GRWVG 236
N + SD L RG + E K S PG +PKA + R R P G + G
Sbjct: 436 NMNASSSSDFLEDDRGVLSSGAVKERKNDSQSKSSHPGRKPKAKSHRDVREHLPEGSYGG 495
Query: 235 SD 230
D
Sbjct: 496 KD 497
>01_07_0238 + 42209407-42209964,42210039-42210561,42212577-42212665,
42212981-42213191,42213265-42213446,42213573-42213812,
42214691-42214878,42215230-42215323,42215407-42215463,
42215552-42215686,42216460-42216525,42216745-42216858,
42217849-42218010,42218093-42218221,42218323-42218424,
42219428-42219504,42219600-42219957
Length = 1094
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 162 SPHYQHARSVPQGTPSDGGNFRPSLPTHRPGNGLR-KGRPAQAFGR 296
SP + RS P G D NF+ S RPGNG KG Q F +
Sbjct: 1017 SPGVKSQRSKPSGRNGDRTNFK-SKSEPRPGNGQNTKGDKPQGFNK 1061
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +2
Query: 164 PPLSARPVRPARDAKRWREFSPIAPNPPARKWTPERTTGPGLRSQPRGLRGFVQRKLRLP 343
PP + P + K +P + +PP+++ P T P +S P +V P
Sbjct: 882 PPTLTPEISPPPEGKSPPSHTPESSSPPSKESEPPPTPTP--KSSPPSHEEYV------P 933
Query: 344 RLTDRSGPPRPRKKVRSESDRSIS-EAQDKRPRIGPSSKS 460
+S PP K S + S S +++ P P+ KS
Sbjct: 934 PSPAKSTPPPEEKSPPSHTPESSSPPSEESEPPPSPTPKS 973
>07_03_1257 - 25241194-25242018
Length = 274
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +2
Query: 164 PPLSARP--VRPARDAKRWREFSPIAPNPPARKWTPERTTGPGLRSQPRGLRGFVQRKLR 337
PPL RP RP A R R P AP+ R TP + R + R+
Sbjct: 28 PPLQPRPRSPRPMPQAVRHRSLQPPAPDVAGRDSTPSPASMTPSRCRTTLASTTTTRRRP 87
Query: 338 LPRLTDRSGPPRPR 379
RL R PR R
Sbjct: 88 PRRLHSRPRHPRGR 101
>07_01_0702 +
5288588-5288889,5289257-5289407,5289543-5289725,
5290063-5290137,5290248-5290403,5290502-5290597,
5290855-5290985,5291057-5291138,5291237-5291586,
5293029-5293234,5293254-5293570
Length = 682
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +2
Query: 233 APNPPARKWTPERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSI 412
AP P AR+ P R+ G L Q +G + L + DR R+ ++
Sbjct: 541 APKPAARRGKPRRSAGRTLHPQSKGDKLVQASNLDSAGIADRKEREELASCWRARFPNNL 600
Query: 413 SE----AQDKRPRIGPSSKSIN 466
+E + D+ R+G S + ++
Sbjct: 601 AERAGCSADRNDRVGRSHREVS 622
>05_05_0335 - 24164714-24165574
Length = 286
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 375 GRGGPERSVXRGRRSFLW 322
G G ER V RG RSFLW
Sbjct: 230 GASGGERQVRRGSRSFLW 247
>05_05_0210 -
23285241-23285338,23286297-23286447,23286660-23286748,
23287108-23288394,23288460-23288516,23289446-23289644,
23290240-23290342,23291048-23291229,23291850-23291899,
23292192-23292360
Length = 794
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 454 GRGSNSGSFVLGFGNASVGLGSDLLSRPRGSRAIR 350
G G++SG + G G+ VGLG LLS GS R
Sbjct: 64 GAGAHSGDLLEGGGHYHVGLGRRLLSGGPGSHPPR 98
>04_01_0034 - 401208-402923
Length = 571
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +2
Query: 125 PTR*PISCRGGHLP--PLSARPVRPARDAKRWREFSPIAPNPPARKWTPERTTGPGLR-S 295
P R P++ + H P PL RP P ++ R P PP P R P +
Sbjct: 284 PMRAPLAEQQPHAPRLPLQPRPAPPPPPPQQQRAKPSRPPPPPPPLDPPPRAAAPPAKCK 343
Query: 296 QPRGLRGFVQR 328
+P G F R
Sbjct: 344 RPDGCERFATR 354
>02_05_1337 -
35780076-35780290,35780377-35780408,35780490-35780584,
35780670-35780743,35780851-35780986,35781072-35781135,
35781333-35781395,35781514-35781656,35781752-35781889,
35781973-35782094,35782210-35782375,35782647-35782652,
35782988-35783059,35783241-35783348,35783719-35783848,
35783964-35784070,35784896-35785005,35785302-35785435,
35785528-35785982,35786068-35786595
Length = 965
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 235 SQPTGPEMDSGKDDRPRPSVAAQGTPRIRPEETSSPPXDGSLWTPSAAKEGQIRVRP 405
S P PE+ + PRPS AQ +P E+ PS++K + +RP
Sbjct: 91 SSPLAPELRQAIMEAPRPSELAQPSPTPPQEQPVDAATTTPHHIPSSSKSIRFPLRP 147
>09_02_0202 + 5735613-5736170
Length = 185
Score = 28.7 bits (61), Expect = 6.1
Identities = 26/66 (39%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 446 VQFGVVCPGLRKCFGRTRI*PSFAAEGVQS--DPSXGGDEVSSGRILGVPWAATEGLGRS 273
V GV PG G P+ AA G S D GGD G GVP AATEG G
Sbjct: 122 VNSGVAPPGAIAGAGGALGRPAAAAGGDGSAVDAPGGGDV--EGHAGGVPVAATEGAGAG 179
Query: 272 SFPESI 255
P +
Sbjct: 180 YPPAHV 185
>05_07_0035 -
27221338-27221433,27221510-27221599,27222056-27222115,
27222231-27222523,27222601-27222757,27222917-27223261,
27223890-27224020,27224119-27224596,27224817-27225563
Length = 798
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 143 SCRGGHLPPLSARPVRPARDAKRWREFSPIAPNPP 247
S GG+ P + P R A ++W P AP PP
Sbjct: 47 SSSGGNRAPPAPNPTRGAPWLQKWGPTDPAAPPPP 81
>04_04_0844 -
28637393-28638118,28638206-28638283,28638431-28638607,
28639124-28639537
Length = 464
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Frame = +2
Query: 152 GGHLPPLSARPVRPARDAKRW------REFSPIAPNPP 247
GG P + +PAR+ KRW RE SP P PP
Sbjct: 14 GGKKPNSGSGDPKPAREKKRWGFGKSFREKSPAHPPPP 51
>10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998
Length = 473
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 394 GSDLLSRPRGSRAIRQXGETKFPLDESSESPGLRPKAWAG---RPFRSPFPGRWVGSDGR 224
G ++S GS+ + TK L++ S++ RP AG RSP R G G
Sbjct: 68 GKIVVSERGGSKVVSMLSSTKLHLEDISDTLYTRPSVLAGAASATTRSPSSRR--GGGGV 125
Query: 223 KFPPSLGV 200
+ PP+ V
Sbjct: 126 RAPPATTV 133
>09_04_0506 - 18188785-18190599
Length = 604
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 164 PPLSARPVRPARDAKRWREFSPIAPNPPARKWTPERTTGPGLRSQP 301
PPL A P P + ++ + +P + PP + PE+ PG+ + P
Sbjct: 72 PPLQAPPPPPQQQQQQQQLQAPPSLPPPPPQRQPEKVHIPGVAAVP 117
>09_03_0126 + 12547695-12548193,12549266-12549285
Length = 172
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 171 YQHARSVPQGTPSDGGNFRPSLPTHRPGNGLRKGR 275
Y+H + P G P G +F + + G GL GR
Sbjct: 135 YRHGQPEPAGRPDGGAHFLATAASLANGGGLSDGR 169
>08_02_1334 - 26224546-26225337
Length = 263
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 363 DPLGRERRSDPSPTEAFPKPRTNDPELDPR 452
DPL R S P+P A P P PE PR
Sbjct: 106 DPLVRRAVSLPAPVTATPPPPPPPPETPPR 135
>08_02_0484 + 17665714-17666877
Length = 387
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -2
Query: 332 VSSGRILGVPWAATEGLGRSSF-PESISGPVGWERW-AKIPAIAWRPLRDGPGVLIMGGD 159
+ GR V +AA GL P + G G R+ A + ++A P + G++ + +
Sbjct: 86 IGQGRHFTV-YAAAPGLAAKRMRPHLVLGEPGGRRFPAALRSLAVPPHPNLAGIVGLS-E 143
Query: 158 VPPDMILAI*WAAAGSPGISALL 90
P + +L + A+AGS G+ ALL
Sbjct: 144 GPGERVLIVERASAGSVGLDALL 166
>07_01_0608 + 4515709-4515951,4516085-4516678
Length = 278
Score = 28.3 bits (60), Expect = 8.1
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +2
Query: 365 PPRPRKKVRSESDRSISEAQDKRPRI 442
PP+ +K+ + ++ + EA+ K+PR+
Sbjct: 47 PPKEKKEAKPAKEKKVKEAKAKKPRV 72
>06_03_0099 +
16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -1
Query: 249 AGGLGAMGENSRHRL-ASLAGRTGRADNGGRCPPRHDIGYLVG 124
AG +G R RL G GR D G C PR D LVG
Sbjct: 129 AGRSSDLGAVYRRRLECRCGGGGGRLDLGAGCGPRRDAPRLVG 171
>05_03_0622 -
16293341-16293350,16293783-16294063,16294343-16294474,
16294561-16294741,16295054-16295096,16295183-16295249,
16296708-16296834,16296985-16297620,16298253-16298761,
16298842-16299157,16299615-16300053,16300128-16300353,
16300441-16300625,16300839-16300950,16301459-16301495,
16301977-16302011,16302497-16302810,16303463-16303475
Length = 1220
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 149 RGGHLPPLSARPVRPARDAKRW--REFSPIAPN 241
R H P L ARP PAR +RW R SP APN
Sbjct: 38 RSNHRPSL-ARPQEPAR--RRWSRRPTSPSAPN 67
>03_06_0642 +
35239658-35240083,35240167-35240238,35240305-35240919,
35241253-35241435,35241604-35241663,35241733-35241936,
35242497-35242745,35243609-35243707,35243760-35243858,
35244463-35244480,35244668-35244862,35244981-35245073,
35245265-35245531,35245884-35246102
Length = 932
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = +2
Query: 233 APNPPARKW--TPERTTGPGLRSQ-PRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESD 403
+P PP R W P P R++ PR R DR PP PR + RS
Sbjct: 8 SPAPPHRDWFFPPAPPFLPSSRARTPRAPFPSTSRSSNPYSFPDRRPPPTPRSRSRSPLP 67
Query: 404 RSISEAQDKRPRIGP 448
+ Q + P P
Sbjct: 68 PPEQQKQQQPPPTTP 82
>03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600
Length = 274
Score = 28.3 bits (60), Expect = 8.1
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 10/95 (10%)
Frame = +2
Query: 122 LPTR*PISCRGGHLPPLSARPVRPARDAKRWREFSPIAPNPP----------ARKWTPER 271
LP R P S GG P S P + AR + R AP+P AR+W
Sbjct: 45 LPRRRPWSRGGGRAAPESTPPAKYARGRRPRRGSGGHAPHPESGGGGGGGGGAREWRDVG 104
Query: 272 TTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRP 376
TT G + RG + R+ GPP P
Sbjct: 105 TTMRGGGGRGRGKSAQAADRC-CRRMPMDGGPPTP 138
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 162 SPHYQHARSVPQGTPSDGGNFRPSL-PTHRPGNGLRKGRP 278
+P+ H R G P+ GG F PS P H PG GRP
Sbjct: 94 APYDHHHRGGGAGVPA-GGEFPPSAHPQHYPGWPGVSGRP 132
>02_05_0265 + 27267361-27268494
Length = 377
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +2
Query: 113 TLLLPTR*PISCRGGHLPPLSARPVRPARDAKRWREFSPIAPNPPARKWTPER 271
T L P P+ C+ LP SA VR WR+ +P++ PP W ER
Sbjct: 25 TQLPPELLPLICK--KLPD-SADFVRFRTVCSAWRDAAPLSDVPPQLPWVVER 74
>01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872
Length = 686
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = -1
Query: 345 RGRRSFLWTN--PRSPLGCDRRPGPVVLSGVHFRAGGLGAMGENSRHRLASLAGRTGRAD 172
R ++LW N G R G VL GV F ++ LASL R R
Sbjct: 122 RDLAAYLWDNFLGGGATGASRPLGDAVLDGVDFDIESPSRFYDDLARNLASLYTRAPRPP 181
Query: 171 NGGR 160
GG+
Sbjct: 182 RGGK 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,057,735
Number of Sequences: 37544
Number of extensions: 690067
Number of successful extensions: 2852
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 2558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2836
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -