Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H14
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical pr... 34 0.14
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.19
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 32 0.44
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 32 0.44
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 32 0.44
Z92785-5|CAB54232.2| 300|Caenorhabditis elegans Hypothetical pr... 32 0.58
AL021504-3|CAB54474.2| 300|Caenorhabditis elegans Hypothetical ... 32 0.58
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 31 1.3
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 1.8
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 30 1.8
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 3.1
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 3.1
U13019-6|AAC24443.1| 206|Caenorhabditis elegans Hypothetical pr... 29 3.1
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 29 3.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.1
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 29 4.1
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 29 5.4
U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical pr... 29 5.4
U50313-4|AAA92328.1| 417|Caenorhabditis elegans Hypothetical pr... 29 5.4
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 29 5.4
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 29 5.4
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 29 5.4
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 29 5.4
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 7.2
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 28 7.2
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 28 7.2
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 28 7.2
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 28 9.5
AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical ... 28 9.5
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 28 9.5
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z70307-3|CAA94329.1| 308|Caenorhabditis elegans Hypothetical
protein C39E9.3 protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -1
Query: 375 GRGGPERSVXR-GRRSFLWTNPRSPLGCDRRPGPVVLSGVHFRAGGLGAMGENSRHRLAS 199
G GP ++ R G + R P+G GPV + G GGLG G L
Sbjct: 202 GPPGPAGAIGRRGMDTVREKGVRGPIGAPGPVGPVGMEGDRGNRGGLGVDGPLGSIGLQG 261
Query: 198 LAGRTGRADNGGRCPP 151
GRTG + G P
Sbjct: 262 PPGRTGSTGDVGESGP 277
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.5 bits (73), Expect = 0.19
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +1
Query: 199 GRQAMAGIFAHRSQPTGPEMDSGKDDRPRPSVAAQGTPRIRPEETSSPPXDGSLWTPSAA 378
G Q + + P GP SG RP P + + P P + SP D PSAA
Sbjct: 72 GPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRPSRSPHSDAP--EPSAA 129
Query: 379 KEGQIRVRPKH 411
+G V KH
Sbjct: 130 TDGFELVFGKH 140
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.25
Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Frame = -1
Query: 369 GGPERSVXRGRRSFLWTNPRSPLGCDRRPGPVVLSGVHFRAGGLGA---MGENSRHRLAS 199
G R+ R R + P P+G PG L G + G +G G+N R
Sbjct: 215 GKDGRNGYRLRPDKITRGPPGPMGARGEPGHRGLPGDNGMPGPMGPPGYRGDNGRRGAPG 274
Query: 198 LAGRTGRADNGG------RCPPR 148
L GRTGR G CPPR
Sbjct: 275 LPGRTGRHGKPGGDSSYCPCPPR 297
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/70 (34%), Positives = 28/70 (40%)
Frame = +2
Query: 242 PPARKWTPERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSISEA 421
PP R P RT+ P + R R R R PR RS PPR R S S
Sbjct: 230 PPRRASPPRRTSSP--KRDARPAREI--RDSREPREVRRSPPPRRAASPRKASSPSAPAK 285
Query: 422 QDKRPRIGPS 451
D++ PS
Sbjct: 286 NDRKRERSPS 295
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +2
Query: 164 PPLSARPVRPARDAKRWREFSPIAPNPPARKWTPERTTGPGL-----RSQPRGLRGFVQR 328
P ARP R RD++ RE +P PP R +P + + P R + R G V
Sbjct: 243 PKRDARPAREIRDSREPREVRR-SP-PPRRAASPRKASSPSAPAKNDRKRERSPSGSVAP 300
Query: 329 KLRLPRLTDRSGPPRPRKKV 388
+R + + PPR R ++
Sbjct: 301 SVR----RESASPPRRRARI 316
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/70 (34%), Positives = 28/70 (40%)
Frame = +2
Query: 242 PPARKWTPERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSISEA 421
PP R P RT+ P + R R R R PR RS PPR R S S
Sbjct: 230 PPRRASPPRRTSSP--KRDARPAREI--RDSREPREVRRSPPPRRAASPRKASSPSAPAK 285
Query: 422 QDKRPRIGPS 451
D++ PS
Sbjct: 286 NDRKRERSPS 295
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +2
Query: 164 PPLSARPVRPARDAKRWREFSPIAPNPPARKWTPERTTGPGL-----RSQPRGLRGFVQR 328
P ARP R RD++ RE +P PP R +P + + P R + R G V
Sbjct: 243 PKRDARPAREIRDSREPREVRR-SP-PPRRAASPRKASSPSAPAKNDRKRERSPSGSVAP 300
Query: 329 KLRLPRLTDRSGPPRPRKKV 388
+R + + PPR R ++
Sbjct: 301 SVR----RESASPPRRRARI 316
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/70 (34%), Positives = 28/70 (40%)
Frame = +2
Query: 242 PPARKWTPERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSISEA 421
PP R P RT+ P + R R R R PR RS PPR R S S
Sbjct: 230 PPRRASPPRRTSSP--KRDARPAREI--RDSREPREVRRSPPPRRAASPRKASSPSAPAK 285
Query: 422 QDKRPRIGPS 451
D++ PS
Sbjct: 286 NDRKRERSPS 295
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +2
Query: 164 PPLSARPVRPARDAKRWREFSPIAPNPPARKWTPERTTGPGL-----RSQPRGLRGFVQR 328
P ARP R RD++ RE +P PP R +P + + P R + R G V
Sbjct: 243 PKRDARPAREIRDSREPREVRR-SP-PPRRAASPRKASSPSAPAKNDRKRERSPSGSVAP 300
Query: 329 KLRLPRLTDRSGPPRPRKKV 388
+R + + PPR R ++
Sbjct: 301 SVR----RESASPPRRRARI 316
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/70 (34%), Positives = 28/70 (40%)
Frame = +2
Query: 242 PPARKWTPERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSISEA 421
PP R P RT+ P + R R R R PR RS PPR R S S
Sbjct: 230 PPRRASPPRRTSSP--KRDARPAREI--RDSREPREVRRSPPPRRAASPRKASSPSAPAK 285
Query: 422 QDKRPRIGPS 451
D++ PS
Sbjct: 286 NDRKRERSPS 295
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +2
Query: 164 PPLSARPVRPARDAKRWREFSPIAPNPPARKWTPERTTGPGL-----RSQPRGLRGFVQR 328
P ARP R RD++ RE +P PP R +P + + P R + R G V
Sbjct: 243 PKRDARPAREIRDSREPREVRR-SP-PPRRAASPRKASSPSAPAKNDRKRERSPSGSVAP 300
Query: 329 KLRLPRLTDRSGPPRPRKKV 388
+R + + PPR R ++
Sbjct: 301 SVR----RESASPPRRRARI 316
>Z92785-5|CAB54232.2| 300|Caenorhabditis elegans Hypothetical
protein F31E9.6 protein.
Length = 300
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = -1
Query: 279 PVVLSGVH---FRAGGLGAMGENSRHRLASLAGR-TGRADNGGRCPP 151
P +L G H FRAGG +G SRH S A R R NG R P
Sbjct: 207 PAILGGAHPGRFRAGGPTGVGVVSRHTRQSGAARGVLRGPNGNRVVP 253
>AL021504-3|CAB54474.2| 300|Caenorhabditis elegans Hypothetical
protein F31E9.6 protein.
Length = 300
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = -1
Query: 279 PVVLSGVH---FRAGGLGAMGENSRHRLASLAGR-TGRADNGGRCPP 151
P +L G H FRAGG +G SRH S A R R NG R P
Sbjct: 207 PAILGGAHPGRFRAGGPTGVGVVSRHTRQSGAARGVLRGPNGNRVVP 253
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 123 CPLDSQYHVGGDISPHYQHARSVPQGTPSDGGNFRPSLPTHRPGNGLRKGRPAQAFGRSP 302
CP G D +P + R G+ GN P+ P PGN R G P + SP
Sbjct: 140 CPAGPPGEQGPDGAPG-EAGRDGQPGSDGQSGNEGPTGPRGSPGNKGRDGNPGR--DGSP 196
Query: 303 G-DSEDSSRG 329
G D +RG
Sbjct: 197 GRPGRDGTRG 206
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 309 SPLGCDRRPGPVVLSGVHFRAGGLGAMGE--NSRHRLASLAGRTGRADNGGRCPPRHDIG 136
SP G PGP +G G G GE N+ R SL GR G G+C P G
Sbjct: 214 SPPGLPGPPGPCGEAGREGPNGTPGLKGEPGNNSIRQISLPGRKGPPGLPGQCGPPGPPG 273
Query: 135 Y 133
Y
Sbjct: 274 Y 274
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/79 (24%), Positives = 28/79 (35%)
Frame = -1
Query: 312 RSPLGCDRRPGPVVLSGVHFRAGGLGAMGENSRHRLASLAGRTGRADNGGRCPPRHDIGY 133
R G + +P P G G LG GE + G G+ +CPPR +
Sbjct: 241 RGDPGNNGKPAPPGPEGFPGPVGDLGDAGEYGLRGVPGRRGSPGKDGGYCQCPPREGSSF 300
Query: 132 LVGSSRVTRHQCLIKLQMN 76
+S + R + N
Sbjct: 301 SSSTSTLNRQSVKVSTSRN 319
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 1.8
Identities = 35/120 (29%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Frame = +3
Query: 126 PLDSQYHVGGDISPHYQHARSVPQGTPSDGGNFRPSLPTHRPGNGLRKGRPAQAFGR-SP 302
P+D + P H P G PS G P P+ P + Q G SP
Sbjct: 126 PVDPSEDPQPSVEPSEDHQ---PSGPPSPG----PVDPSEDPQPSVEPSEDPQPSGPPSP 178
Query: 303 GD---SEDSSRGNFVSPX*RIALDPLGRERRSDPSPTEAFPKPRTNDPELDPRPNQ*MKP 473
G SED SP +DP +PSP+ P P DP DP+P++ P
Sbjct: 179 GPVDPSEDPQPSGSSSPG---PVDP-----SDEPSPSGP-PSPGPVDPSEDPKPSEPPSP 229
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 242 PPARKWTPERTTGPGLR-SQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSISE 418
PPAR R+ P R S PRG R R +R R P P R DRS S
Sbjct: 57 PPARGG---RSRSPIRRGSPPRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSR 113
Query: 419 AQDK-RPRIGPSSKSINEA 472
+ + PR P+++S + A
Sbjct: 114 QRRRASPRRSPAARSASPA 132
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 204 PSDGGNFRPSLPTHRPGNGLRKGRPAQAFGRSPGDSEDSSRG 329
P GG P P RPG+ + GRPA G +P +G
Sbjct: 151 PCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKG 192
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 174 QHARSVPQGTPSDGGNFRPSLPTHRPGNGLRKGRPA-QAFGRSPG 305
+H+ VP G P D G P P PG + G P + FG PG
Sbjct: 211 RHSAGVP-GKPGDVGPCGPEGPKGAPGTPGKNGAPGDRGFGGQPG 254
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/73 (30%), Positives = 26/73 (35%)
Frame = -1
Query: 315 PRSPLGCDRRPGPVVLSGVHFRAGGLGAMGENSRHRLASLAGRTGRADNGGRCPPRHDIG 136
P +P G D PGP LSG+ G G G R L G G + G P
Sbjct: 1222 PGAP-GTDGYPGPPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAPSRGFT 1280
Query: 135 YLVGSSRVTRHQC 97
+ S QC
Sbjct: 1281 FAKHSQTTAVPQC 1293
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/73 (30%), Positives = 26/73 (35%)
Frame = -1
Query: 315 PRSPLGCDRRPGPVVLSGVHFRAGGLGAMGENSRHRLASLAGRTGRADNGGRCPPRHDIG 136
P +P G D PGP LSG+ G G G R L G G + G P
Sbjct: 1479 PGAP-GTDGYPGPPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAPSRGFT 1537
Query: 135 YLVGSSRVTRHQC 97
+ S QC
Sbjct: 1538 FAKHSQTTAVPQC 1550
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/73 (30%), Positives = 26/73 (35%)
Frame = -1
Query: 315 PRSPLGCDRRPGPVVLSGVHFRAGGLGAMGENSRHRLASLAGRTGRADNGGRCPPRHDIG 136
P +P G D PGP LSG+ G G G R L G G + G P
Sbjct: 1478 PGAP-GTDGYPGPPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAPSRGFT 1536
Query: 135 YLVGSSRVTRHQC 97
+ S QC
Sbjct: 1537 FAKHSQTTAVPQC 1549
>U13019-6|AAC24443.1| 206|Caenorhabditis elegans Hypothetical
protein T12A2.3 protein.
Length = 206
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 376 AKEGQIRVRPKHFRSPGQTTPN 441
A E Q RV PK RSPG T+P+
Sbjct: 73 ADEHQSRVAPKRSRSPGSTSPS 94
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/73 (30%), Positives = 26/73 (35%)
Frame = -1
Query: 315 PRSPLGCDRRPGPVVLSGVHFRAGGLGAMGENSRHRLASLAGRTGRADNGGRCPPRHDIG 136
P +P G D PGP LSG+ G G G R L G G + G P
Sbjct: 33 PGAP-GTDGYPGPPGLSGMPGHGGDQGFQGAAGRTGNQGLPGTPGYPGSPGGWAPSRGFT 91
Query: 135 YLVGSSRVTRHQC 97
+ S QC
Sbjct: 92 FAKHSQTTAVPQC 104
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Frame = +3
Query: 162 SPHYQHARSVPQGTPSDGGNFRPSLPTHRP-GNGLRKGRPAQAFGRSP-GDSEDS-SRGN 332
+P Q P G PS+ G + P + G +G P Q FG P G + +G+
Sbjct: 288 APPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGS 347
Query: 333 FVSPX*RIALDPLGRERRSDPSPTEAFPKPRTNDPELDP 449
F +P + P + P P + P P+ P
Sbjct: 348 FGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGP 386
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/79 (29%), Positives = 29/79 (36%)
Frame = -1
Query: 369 GGPERSVXRGRRSFLWTNPRSPLGCDRRPGPVVLSGVHFRAGGLGAMGENSRHRLASLAG 190
GGP ++ RG + P P G + G G AG G G + A G
Sbjct: 191 GGPGKNGQRGSGAPGPAGPEGPAGPAGQDGAPGQDGAPGNAGSEGPAGAPGKDGEAGAPG 250
Query: 189 RTGRADNGGRCPPRHDIGY 133
+ G A GG P D Y
Sbjct: 251 QDGEA--GGEGIPGQDAAY 267
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 232 RSQPTGPEMDSGKDDRPRPSVAAQGTPRIRPEETSSPPXDG-SLWTPSAAKEGQIRVRPK 408
R + T + +DDR +P + P+ + TS PP + TP +A I + +
Sbjct: 1914 RRRRTSANLSKSEDDRDKPE-SQSTAPKSKERRTSEPPASHVAFHTPGSATPHDINLSIE 1972
Query: 409 H 411
H
Sbjct: 1973 H 1973
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 232 RSQPTGPEMDSGKDDRPRPSVAAQGTPRIRPEETSSPPXDG-SLWTPSAAKEGQIRVRPK 408
R + T + +DDR +P + P+ + TS PP + TP +A I + +
Sbjct: 340 RRRRTSANLSKSEDDRDKPE-SQSTAPKSKERRTSEPPASHVAFHTPGSATPHDINLSIE 398
Query: 409 H 411
H
Sbjct: 399 H 399
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 232 RSQPTGPEMDSGKDDRPRPSVAAQGTPRIRPEETSSPPXDG-SLWTPSAAKEGQIRVRPK 408
R + T + +DDR +P + P+ + TS PP + TP +A I + +
Sbjct: 158 RRRRTSANLSKSEDDRDKPE-SQSTAPKSKERRTSEPPASHVAFHTPGSATPHDINLSIE 216
Query: 409 H 411
H
Sbjct: 217 H 217
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 232 RSQPTGPEMDSGKDDRPRPSVAAQGTPRIRPEETSSPPXDG-SLWTPSAAKEGQIRVRPK 408
R + T + +DDR +P + P+ + TS PP + TP +A I + +
Sbjct: 53 RRRRTSANLSKSEDDRDKPE-SQSTAPKSKERRTSEPPASHVAFHTPGSATPHDINLSIE 111
Query: 409 H 411
H
Sbjct: 112 H 112
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = +2
Query: 206 KRWREFSPIAPNPPARKWTPERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKK 385
KR R S +P P+RK + P S+ R R R + PPRP +K
Sbjct: 108 KRQRHDSDNSPPRPSRKRN-DSDNSPPRPSRNRHDSDKDNSPPRRRRHDSDNSPPRPSRK 166
Query: 386 VRSESDRSISEAQDKRPR 439
+R ES + + R R
Sbjct: 167 IREESPSARNRRSPPRTR 184
>U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical
protein F31F7.2 protein.
Length = 689
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +1
Query: 223 FAHRSQPTGPEMDSGKDDRPRPSVAAQGTPR---IRPEETSSPPXDGSLWTPSAAKEGQI 393
F S+ TG E GK+ R +A+ TPR I+ SP +GS A G
Sbjct: 385 FHDHSEHTGKERGRGKEHRRDSGIASPRTPRDVEIQVTPIPSPVHNGSDGKDDATSSG-- 442
Query: 394 RVRPKHFRSPGQTTPNWTLVQINK*SRR 477
P+ S G T + + +RR
Sbjct: 443 --TPESIESSGSDVTETTEDDLEELNRR 468
>U50313-4|AAA92328.1| 417|Caenorhabditis elegans Hypothetical
protein F44C4.2 protein.
Length = 417
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 394 GSDLLSRPRGSRAIRQXGETKFPLDESSESPGLRP 290
GSD S P GS A T S ESPG+ P
Sbjct: 96 GSDEFSTPNGSPAQSDYSPTNLSRKNSVESPGIDP 130
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +3
Query: 198 GTPSDGGNFRPSLPTHRPGNGLRKGRPAQAFGRSP--GDSEDSSRGN 332
G P D G+ S +PGN R G+P Q P D D GN
Sbjct: 218 GPPGDDGDEGQSGEAGQPGNDGRDGKPGQVGPPGPPGKDGVDGENGN 264
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 192 PQGTPSDGGNFRPSLPTHRPGNGLRKGRPAQAFGRSPGDSEDSSRGN 332
PQG P G H PGN R G P G+ +D S+GN
Sbjct: 194 PQGRPGQRGEPGQPGTVHTPGNPGRPG-PQGPRGQQGEPGKDGSKGN 239
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Frame = +1
Query: 193 RKGRQAMAGIFAHRSQPTGPEMDSGKDDRPR-----PSVAAQGTPRIRPEETSSPPXDGS 357
R+G++ +G +P +D + P+ P V A T + P TSS P D
Sbjct: 436 RRGQKRTSGGSGKLVEPKKEPVDEPAEKIPKRSEAAPEVPATATTKEAPPSTSSSPPDAP 495
Query: 358 LWTPSAAKEGQIRVRPKHFRS 420
TP+ R P+ R+
Sbjct: 496 A-TPATPASSDSRDSPRKIRA 515
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -1
Query: 315 PRSPLGCDRRPGPVVLSGVHFRAGGLGAMGENSRHRLASLAGRTGRADNGGRCPPRHDIG 136
P P G PGP+ G +G GA+G+ G G + GR PR G
Sbjct: 142 PAGPPGPPGPPGPLGPRGDKGPSGPRGALGDQGETGPVGEIGDQGPPGSAGRAGPRGQAG 201
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Frame = +1
Query: 226 AHRSQPTGPEMDSGKDDRPRPSVAAQGTPRIRPEETSS-PPXDGSLWTPSAAKEGQIRVR 402
A ++QP + S P V A TP + D PS + E +
Sbjct: 425 AQKAQPVTQQQASAPPTSPSAPVQAPNTPTQKASSQDPIVQQDPPPKEPSISSEPTTTKK 484
Query: 403 PKHFRSPGQTTPNWT 447
P+ SPG TP T
Sbjct: 485 PRKSFSPGSATPKHT 499
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 250 PEMDSGKDDRPRPSVAAQGTPRIRPEETSSPPXDGSL 360
P S DR PS + G P + EET + +GS+
Sbjct: 510 PSSMSETPDRRSPSTVSNGAPNLTAEETPTKKLNGSV 546
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 250 PEMDSGKDDRPRPSVAAQGTPRIRPEETSSPPXDGSL 360
P S DR PS + G P + EET + +GS+
Sbjct: 513 PSSMSETPDRRSPSTVSNGAPNLTAEETPTKKLNGSV 549
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 250 PEMDSGKDDRPRPSVAAQGTPRIRPEETSSPPXDGSL 360
P S DR PS + G P + EET + +GS+
Sbjct: 513 PSSMSETPDRRSPSTVSNGAPNLTAEETPTKKLNGSV 549
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 335 RLPRLTDRSGPPRPRKKVRSESDRSISEAQDKRPRIGPSSKSINEA 472
R+P+++DR G + + S I+ +K PR+ S I +A
Sbjct: 168 RIPKISDREGAGTSGQSSSNVSTPGITPLDNKTPRMQKKSNEIGQA 213
>AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical
protein H24G06.1e protein.
Length = 543
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 263 PERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSISE 418
PE+ G R RG VQ+K+ R ++SG R + ESD + S+
Sbjct: 277 PEQFEDTGSPFAQRMARGAVQKKMERYRAKNKSGNVVGRNQTSEESDSNNSD 328
>AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical
protein H24G06.1d protein.
Length = 669
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 263 PERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSISE 418
PE+ G R RG VQ+K+ R ++SG R + ESD + S+
Sbjct: 403 PEQFEDTGSPFAQRMARGAVQKKMERYRAKNKSGNVVGRNQTSEESDSNNSD 454
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 263 PERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSISE 418
PE+ G R RG VQ+K+ R ++SG R + ESD + S+
Sbjct: 1335 PEQFEDTGSPFAQRMARGAVQKKMERYRAKNKSGNVVGRNQTSEESDSNNSD 1386
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 263 PERTTGPGLRSQPRGLRGFVQRKLRLPRLTDRSGPPRPRKKVRSESDRSISE 418
PE+ G R RG VQ+K+ R ++SG R + ESD + S+
Sbjct: 1414 PEQFEDTGSPFAQRMARGAVQKKMERYRAKNKSGNVVGRNQTSEESDSNNSD 1465
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,520,593
Number of Sequences: 27780
Number of extensions: 475572
Number of successful extensions: 1964
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1943
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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