Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H09
(840 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 146 1e-35
07_01_0578 + 4295386-4296489,4297394-4297507 146 2e-35
08_02_1278 - 25838146-25839411 32 0.65
08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887 31 1.1
10_02_0199 + 6668902-6669293,6669825-6669882 31 1.5
03_05_1062 - 30043596-30043811,30044083-30044178,30044387-300444... 30 2.0
03_05_0799 + 27809301-27811550 29 3.5
07_03_0600 + 19866757-19867218,19867920-19868429 29 4.6
01_01_0539 + 3952039-3952219,3952295-3952984,3953115-3953191,395... 29 4.6
04_04_0347 + 24564589-24565296 25 5.8
08_02_1359 + 26382605-26382815,26382907-26382998,26383722-263837... 29 6.1
07_03_1026 - 23369298-23370326 29 6.1
03_05_0452 + 24464134-24464442 29 6.1
03_05_0366 - 23505755-23506441 29 6.1
07_01_0380 - 2834080-2834451,2835945-2836130 28 8.1
02_04_0457 + 23093020-23093343,23093798-23093806 28 8.1
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 146 bits (355), Expect = 1e-35
Identities = 72/143 (50%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ARGH IE +PE
Sbjct: 94 AFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPSLVLARGHRIEGVPEF 153
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV+D ++ I KT Q++ L+++ A++ K S +RAGKGKMRNRR I RKGPLI
Sbjct: 154 PLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKGPLIV 213
Query: 732 FNKD-QGLTRAFRNIPGVELLNV 797
+ + + +AFRN+PGV++ NV
Sbjct: 214 YGTEGSKVVKAFRNLPGVDVANV 236
Score = 91.9 bits (218), Expect = 6e-19
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQG
Sbjct: 38 DVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQG 93
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 146 bits (354), Expect = 2e-35
Identities = 71/143 (49%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WR+WHR VN ARGH IE +PEL
Sbjct: 95 AFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVLARGHRIETVPEL 154
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLV++D + I KT QA+ L+++ A++ K S +R GKGKMRNRR I RKGPLI
Sbjct: 155 PLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKGPLIV 214
Query: 732 FNKD-QGLTRAFRNIPGVELLNV 797
+ + + +AFRN+PGV++ NV
Sbjct: 215 YGTEGSKIVKAFRNLPGVDVANV 237
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQG
Sbjct: 39 DVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQG 94
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 620 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 513
A +E LF L+D+LD V +G+L LF+ S++L
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>08_02_1421 - 26961716-26963650,26967316-26967942,26969832-26970887
Length = 1205
Score = 31.1 bits (67), Expect = 1.1
Identities = 31/89 (34%), Positives = 38/89 (42%)
Frame = -2
Query: 680 LTSTKTLRLVHLKDNRPCLEAPQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERW 501
L S TLR VHL + QE + L L L VG N+ K G F + S L++
Sbjct: 947 LKSLHTLRHVHLAWGNTVI---QEIERLTQLRKL-GVVGINK-KNGPSFYSAISKLSQLE 1001
Query: 500 DASSSNGCCQGRSPLSEVDGTVPAPPGLR 414
S G CQG S T P P L+
Sbjct: 1002 SLSVCAGWCQGLHGTSSSSSTSPPPENLQ 1030
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 290 AESWGTGRAVARIPRVRGGGTHR 358
A+SW TGRA A + R R GG R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRR 58
>03_05_1062 -
30043596-30043811,30044083-30044178,30044387-30044448,
30044990-30045023,30045220-30046173
Length = 453
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -2
Query: 611 EDDSLFGLVDLLDFVGYN--QGKLGNLFNNVSSSLNERWDASSSNGCCQGR 465
+DD +F V LLD VGYN +G++ N SL + W S CCQG+
Sbjct: 331 DDDVVFLHVKLLDLVGYNFISRTVGSILIN---SLLDAWH-SCVYICCQGK 377
>03_05_0799 + 27809301-27811550
Length = 749
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 367 GXPSVTCVVVDVCSPPRSPGGAGTVPSTSDSGERPWQQP 483
G PS V+ +PP SP G G PS WQQP
Sbjct: 400 GSPSSVSAVMSPFTPPMSPSGNGMPPSLG------WQQP 432
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/56 (23%), Positives = 22/56 (39%)
Frame = -2
Query: 434 PAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 267
P PP + GG H + G P +G++ + P+ H++ PP
Sbjct: 4 PPPPTMNGGHHAAPPPPQVSGAPPPPHGHYQQQPPPQPYCQQQQPLPPHYYQAGPP 59
>01_01_0539 +
3952039-3952219,3952295-3952984,3953115-3953191,
3953356-3953931
Length = 507
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = -2
Query: 440 TVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 267
T A P + G H +T H T + Y +HHH H Q H + H PP
Sbjct: 353 TQAAGPAIYGA-HPATQPHYTAAVAAQEYYHHHHHHL---QHHPAAAALVHHRAVAPP 406
>04_04_0347 + 24564589-24565296
Length = 235
Score = 25.4 bits (53), Expect(2) = 5.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -2
Query: 404 HTSTTTHVTEGXPDRTYGYHHHGH 333
H V + P ++ +HHHGH
Sbjct: 78 HAPAPAPVRDDKPSPSHHHHHHGH 101
Score = 21.8 bits (44), Expect(2) = 5.8
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 356 YGYHHHGHA 330
+G+HHH HA
Sbjct: 99 HGHHHHRHA 107
>08_02_1359 +
26382605-26382815,26382907-26382998,26383722-26383791,
26383895-26384013,26384580-26384676,26384781-26384860,
26384986-26385180,26385460-26385520,26386408-26386468,
26386900-26386993,26387085-26387157,26387158-26387270,
26387444-26387587
Length = 469
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2
Query: 524 SSSLNERWDASSSNGCCQGRSPLSEVDGTVPAPP 423
SSSL A+SSNGC +P + V+G P PP
Sbjct: 21 SSSLPTSPSAASSNGCGGNDAP-AAVNGFAPPPP 53
>07_03_1026 - 23369298-23370326
Length = 342
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -2
Query: 500 DASSSNGCCQGRS-PLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRT 357
DA S+ GC + RS P+ T PA R + T H D T
Sbjct: 190 DAESAQGCARTRSPPVRSARATTPAASPSRSKKETPVRAHAAVRGDDAT 238
>03_05_0452 + 24464134-24464442
Length = 102
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 232 VQELEAALLREQGGWSPNQCRIMGYRTCCCPNSA 333
V+++ ++LLR G Q ++G R C C NSA
Sbjct: 21 VEKVRSSLLRVLGLLRGGQASMLGKRACFCSNSA 54
>03_05_0366 - 23505755-23506441
Length = 228
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 251 PYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTH 355
P C S E + +AES TG A R R+ G T+
Sbjct: 134 PRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPTN 168
>07_01_0380 - 2834080-2834451,2835945-2836130
Length = 185
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Frame = +2
Query: 278 HQ-TSAESWGTGRAVARIPRVRGGGTHRSGQGCLR*HVSWWTYVRPH---EALAALAPSR 445
HQ S+ G A AR V G + SG G V P +A AA AP+
Sbjct: 92 HQGESSSGGGVSTAAARHCDVAGSSSSHSGSGSGSATPPRPALVSPRAGLQAAAAAAPTM 151
Query: 446 QPPTAESGLGSSR 484
P A SGL R
Sbjct: 152 NQPPAASGLSMKR 164
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 275 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
G + S W G A A VRGGG RSG G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGG 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,957,918
Number of Sequences: 37544
Number of extensions: 587073
Number of successful extensions: 1954
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1944
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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