BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H09
(840 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 190 5e-48
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 190 5e-48
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 190 5e-48
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 189 9e-48
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 183 6e-46
AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein pr... 36 0.24
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 34 0.74
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 34 0.74
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 34 0.74
BT006686-1|AAP35332.1| 532|Homo sapiens growth factor receptor-... 33 0.97
BC057847-1|AAH57847.1| 388|Homo sapiens chromosome X open readi... 33 0.97
BC017665-1|AAH17665.2| 388|Homo sapiens chromosome X open readi... 33 0.97
BC006535-1|AAH06535.1| 532|Homo sapiens growth factor receptor-... 33 0.97
AL135959-1|CAI42479.1| 388|Homo sapiens chromosome X open readi... 33 0.97
AK222870-1|BAD96590.1| 532|Homo sapiens growth factor receptor-... 33 0.97
AK222849-1|BAD96569.1| 532|Homo sapiens growth factor receptor-... 33 0.97
AK128718-1|BAC87589.1| 410|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK023308-1|BAB14518.1| 618|Homo sapiens protein ( Homo sapiens ... 32 3.0
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein. 32 3.0
BX538184-1|CAD98056.1| 215|Homo sapiens hypothetical protein pr... 31 5.2
BC101466-1|AAI01467.1| 1849|Homo sapiens SET binding factor 2 pr... 31 5.2
BC063656-1|AAH63656.1| 230|Homo sapiens SBF2 protein protein. 31 5.2
BC053867-1|AAH53867.1| 254|Homo sapiens SBF2 protein protein. 31 5.2
BC043389-1|AAH43389.1| 243|Homo sapiens SBF2 protein protein. 31 5.2
BC011143-1|AAH11143.1| 100|Homo sapiens SBF2 protein protein. 31 5.2
AY234241-1|AAO62733.1| 1849|Homo sapiens SET binding factor 2 pr... 31 5.2
AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein. 31 6.9
BC015504-1|AAH15504.1| 301|Homo sapiens SCO cytochrome oxidase ... 30 9.1
AF295386-1|AAG23836.1| 301|Homo sapiens cytochrome oxidase defi... 30 9.1
AF183424-1|AAG09693.1| 301|Homo sapiens SCO1/2 protein protein. 30 9.1
AF026852-1|AAD08641.1| 301|Homo sapiens h-sco1 protein. 30 9.1
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 105 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 164
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 165 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 224
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 225 YNEDNGIIKAFRNIPGITLLNVS 247
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 49 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 104
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 190 bits (463), Expect = 5e-48
Identities = 87/143 (60%), Positives = 105/143 (73%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN ++GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 189 bits (461), Expect = 9e-48
Identities = 87/143 (60%), Positives = 104/143 (72%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGGRMFAPTK WRRWHR VN +GH IE++PEL
Sbjct: 91 AFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMPKGHRIEEVPEL 150
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV DKV+ KTK+AV+ L++LKAW+ I KVY SQR+RAGKGKMRNRRRIQR+GP I
Sbjct: 151 PLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCII 210
Query: 732 FNKDQGLTRAFRNIPGVELLNVT 800
+N+D G+ +AFRNIPG+ LLNV+
Sbjct: 211 YNEDNGIIKAFRNIPGITLLNVS 233
Score = 103 bits (248), Expect = 6e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DIVNFVHANLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 90
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 183 bits (446), Expect = 6e-46
Identities = 107/237 (45%), Positives = 135/237 (56%), Gaps = 2/237 (0%)
Frame = +3
Query: 96 LSVARPLLSVYSEMSETVQGAAKPLPXRIQGRPYVRTWSMMFTFLCPRTRG--SPTA*AR 269
++VARPL+SVYSE E+ G LP + + + T L R + + A
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 270 RLVTKPVPNHGVPDVLLPEFRXXXXXXPIGPVRXAFGNMCRGGRMFAPTKPWRRWHRPVN 449
G +P R + AFGNMCRGGRMFAPTK WRRWHR VN
Sbjct: 60 HQTRAESWGTGRAVARIPRVRGGGTHRS---GQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Query: 450 XXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKA 629
++GH IE+ PELPLVV DKV+ KTK+AV+ L++LKA
Sbjct: 117 TTQKRYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKA 176
Query: 630 WSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIXFNKDQGLTRAFRNIPGVELLNVT 800
W+ I KVY SQR+RAGKGKMRN RRIQR+GP I +N+D G+ +AFRNIPG+ LLNV+
Sbjct: 177 WNDIKKVYASQRMRAGKGKMRN-RRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVS 232
Score = 101 bits (243), Expect = 2e-21
Identities = 45/56 (80%), Positives = 50/56 (89%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
D+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 35 DMVNFVHTNLRKNNRQPYAVSELAGHQTRAESWGTGRAVARIPRVRGGGTHRSGQG 90
>AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -2
Query: 518 SLNERWDASSSNGCCQGRSPLSEVDGTVPAPPGL 417
+L +W S+G C G SPLS PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 33.9 bits (74), Expect = 0.74
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 376 SVTCVVVDVCSPPRSPGGAGTVPSTSDSGERPWQQ 480
S T + D CSP SPG +G+ + DSG+RP Q+
Sbjct: 2915 SETSSLADPCSP--SPGASGSAGKSGDSGDRPGQK 2947
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 33.9 bits (74), Expect = 0.74
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 376 SVTCVVVDVCSPPRSPGGAGTVPSTSDSGERPWQQ 480
S T + D CSP SPG +G+ + DSG+RP Q+
Sbjct: 2001 SETSSLADPCSP--SPGASGSAGKSGDSGDRPGQK 2033
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 33.9 bits (74), Expect = 0.74
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 376 SVTCVVVDVCSPPRSPGGAGTVPSTSDSGERPWQQ 480
S T + D CSP SPG +G+ + DSG+RP Q+
Sbjct: 1765 SETSSLADPCSP--SPGASGSAGKSGDSGDRPGQK 1797
>BT006686-1|AAP35332.1| 532|Homo sapiens growth factor
receptor-bound protein 7 protein.
Length = 532
Score = 33.5 bits (73), Expect = 0.97
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 373 PSVTCVVVDVCSPPRSPGGAGTVPSTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSF 552
P ++ D+C P +P G P T E QPLL+ + R R E+ PS
Sbjct: 8 PHLSSSPEDLCPAPGTPPGTPRPPDTPLPEEVKRSQPLLIPTTGRKLREEERRATSLPSI 67
Query: 553 P 555
P
Sbjct: 68 P 68
>BC057847-1|AAH57847.1| 388|Homo sapiens chromosome X open reading
frame 39 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.97
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -2
Query: 611 EDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDASSS--------NGCCQGRSPL 456
+ D + L+D DF ++ G++ ++VSSS++ WD S S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 455 SEVDGTVPAPPGL 417
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>BC017665-1|AAH17665.2| 388|Homo sapiens chromosome X open reading
frame 39 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.97
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -2
Query: 611 EDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDASSS--------NGCCQGRSPL 456
+ D + L+D DF ++ G++ ++VSSS++ WD S S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 455 SEVDGTVPAPPGL 417
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>BC006535-1|AAH06535.1| 532|Homo sapiens growth factor
receptor-bound protein 7 protein.
Length = 532
Score = 33.5 bits (73), Expect = 0.97
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 373 PSVTCVVVDVCSPPRSPGGAGTVPSTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSF 552
P ++ D+C P +P G P T E QPLL+ + R R E+ PS
Sbjct: 8 PHLSSSPEDLCPAPGTPPGTPRPPDTPLPEEVKRSQPLLIPTTGRKLREEERRATSLPSI 67
Query: 553 P 555
P
Sbjct: 68 P 68
>AL135959-1|CAI42479.1| 388|Homo sapiens chromosome X open reading
frame 39 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.97
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -2
Query: 611 EDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDASSS--------NGCCQGRSPL 456
+ D + L+D DF ++ G++ ++VSSS++ WD S S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 455 SEVDGTVPAPPGL 417
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>AK222870-1|BAD96590.1| 532|Homo sapiens growth factor
receptor-bound protein 7 variant protein.
Length = 532
Score = 33.5 bits (73), Expect = 0.97
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 373 PSVTCVVVDVCSPPRSPGGAGTVPSTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSF 552
P ++ D+C P +P G P T E QPLL+ + R R E+ PS
Sbjct: 8 PHLSSSPEDLCPAPGTPPGTPRPPDTPLPEEVKRSQPLLIPTTGRKLREEERRATSLPSI 67
Query: 553 P 555
P
Sbjct: 68 P 68
>AK222849-1|BAD96569.1| 532|Homo sapiens growth factor
receptor-bound protein 7 variant protein.
Length = 532
Score = 33.5 bits (73), Expect = 0.97
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 373 PSVTCVVVDVCSPPRSPGGAGTVPSTSDSGERPWQQPLLLLASQRSFRLEDTLLKRFPSF 552
P ++ D+C P +P G P T E QPLL+ + R R E+ PS
Sbjct: 8 PHLSSSPEDLCPAPGTPPGTPRPPDTPLPEEVKRSQPLLIPTTGRKLREEERRATSLPSI 67
Query: 553 P 555
P
Sbjct: 68 P 68
>AK128718-1|BAC87589.1| 410|Homo sapiens protein ( Homo sapiens
cDNA FLJ46885 fis, clone UTERU3016274. ).
Length = 410
Score = 33.1 bits (72), Expect = 1.3
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 316 CCPNSACPWWWYP*VRSGXPSVTCVVVDVCSPPRSPGGAGTVPSTSDSGERPWQQPL 486
C P+ WW P RSG D+ P++P G G+ R WQ+PL
Sbjct: 356 CFPHGERGWWSVP-TRSGCLQAQLCPADLTGQPQAP-GLGSSTCRHRRKPRAWQEPL 410
>AK023308-1|BAB14518.1| 618|Homo sapiens protein ( Homo sapiens
cDNA FLJ13246 fis, clone OVARC1000682, highly similar to
PROCESSING ALPHA-1,2-MANNOSIDASE (EC 3.2.1.-). ).
Length = 618
Score = 31.9 bits (69), Expect = 3.0
Identities = 27/89 (30%), Positives = 39/89 (43%)
Frame = -2
Query: 533 NNVSSSLNERWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTY 354
N +S+LN + +SSS+G QGR+ T P + T +H T+G +
Sbjct: 420 NTRNSTLNIPFSSSSSSGDIQGRN-------TSPNVSVQKSNPMRITESHATKGHMNPPV 472
Query: 353 GYHHHGHAEFGQQHVRYPMIRHWFGDQPP 267
+ HG A H P + H GDQ P
Sbjct: 473 TTNMHGVARPALPH---PSVSHGNGDQGP 498
>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
Length = 1685
Score = 31.9 bits (69), Expect = 3.0
Identities = 27/89 (30%), Positives = 39/89 (43%)
Frame = -2
Query: 533 NNVSSSLNERWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTY 354
N +S+LN + +SSS+G QGR+ T P + T +H T+G +
Sbjct: 1327 NTRNSTLNIPFSSSSSSGDIQGRN-------TSPNVSVQKSNPMRITESHATKGHMNPPV 1379
Query: 353 GYHHHGHAEFGQQHVRYPMIRHWFGDQPP 267
+ HG A H P + H GDQ P
Sbjct: 1380 TTNMHGVARPALPH---PSVSHGNGDQGP 1405
>BX538184-1|CAD98056.1| 215|Homo sapiens hypothetical protein
protein.
Length = 215
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGY 348
R+ S + C+G L+EV+ +PA P + +HTS R Y +
Sbjct: 141 RYYDSGEDTSCKGHIDLAEVEMVIPAGPSMGAPKHTSDKAFFDLKTSKRVYNF 193
>BC101466-1|AAI01467.1| 1849|Homo sapiens SET binding factor 2
protein.
Length = 1849
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGY 348
R+ S + C+G L+EV+ +PA P + +HTS R Y +
Sbjct: 1775 RYYDSGEDTSCKGHIDLAEVEMVIPAGPSMGAPKHTSDKAFFDLKTSKRVYNF 1827
>BC063656-1|AAH63656.1| 230|Homo sapiens SBF2 protein protein.
Length = 230
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGY 348
R+ S + C+G L+EV+ +PA P + +HTS R Y +
Sbjct: 156 RYYDSGEDTSCKGHIDLAEVEMVIPAGPSMGAPKHTSDKAFFDLKTSKRVYNF 208
>BC053867-1|AAH53867.1| 254|Homo sapiens SBF2 protein protein.
Length = 254
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGY 348
R+ S + C+G L+EV+ +PA P + +HTS R Y +
Sbjct: 180 RYYDSGEDTSCKGHIDLAEVEMVIPAGPSMGAPKHTSDKAFFDLKTSKRVYNF 232
>BC043389-1|AAH43389.1| 243|Homo sapiens SBF2 protein protein.
Length = 243
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGY 348
R+ S + C+G L+EV+ +PA P + +HTS R Y +
Sbjct: 169 RYYDSGEDTSCKGHIDLAEVEMVIPAGPSMGAPKHTSDKAFFDLKTSKRVYNF 221
>BC011143-1|AAH11143.1| 100|Homo sapiens SBF2 protein protein.
Length = 100
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGY 348
R+ S + C+G L+EV+ +PA P + +HTS R Y +
Sbjct: 26 RYYDSGEDTSCKGHIDLAEVEMVIPAGPSMGAPKHTSDKAFFDLKTSKRVYNF 78
>AY234241-1|AAO62733.1| 1849|Homo sapiens SET binding factor 2
protein.
Length = 1849
Score = 31.1 bits (67), Expect = 5.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGY 348
R+ S + C+G L+EV+ +PA P + +HTS R Y +
Sbjct: 1775 RYYDSGEDTSCKGHIDLAEVEMVIPAGPSMGAPKHTSDKAFFDLKTSKRVYNF 1827
>AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein.
Length = 287
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 416 EALAALAPSRQPPTAESGLGSSRCCYWRPSAR 511
E L A R PPT S ++ CC WR + R
Sbjct: 191 ENLLADVKGRGPPTTRSRAATANCCAWRAAIR 222
>BC015504-1|AAH15504.1| 301|Homo sapiens SCO cytochrome oxidase
deficient homolog 1 (yeast) protein.
Length = 301
Score = 30.3 bits (65), Expect = 9.1
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = -2
Query: 578 LDFVGYNQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHT 399
L+F G +G L + E W AS G C G PLS P PP + G
Sbjct: 27 LEFWGPAEGTARVLLRQFCARQAEAWRASGRPGYCLGTRPLSTAR---PPPPWSQKGPGD 83
Query: 398 ST 393
ST
Sbjct: 84 ST 85
>AF295386-1|AAG23836.1| 301|Homo sapiens cytochrome oxidase
deficient in yeast homolog 1 protein.
Length = 301
Score = 30.3 bits (65), Expect = 9.1
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = -2
Query: 578 LDFVGYNQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHT 399
L+F G +G L + E W AS G C G PLS P PP + G
Sbjct: 27 LEFWGPAEGTARVLLRQFCARQAEAWRASGRPGYCLGTRPLSTAR---PPPPWSQKGPGD 83
Query: 398 ST 393
ST
Sbjct: 84 ST 85
>AF183424-1|AAG09693.1| 301|Homo sapiens SCO1/2 protein protein.
Length = 301
Score = 30.3 bits (65), Expect = 9.1
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = -2
Query: 578 LDFVGYNQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHT 399
L+F G +G L + E W AS G C G PLS P PP + G
Sbjct: 27 LEFWGPAEGTARVLLRQFCARQAEAWRASGRPGYCLGTRPLSTAR---PPPPWSQKGPGD 83
Query: 398 ST 393
ST
Sbjct: 84 ST 85
>AF026852-1|AAD08641.1| 301|Homo sapiens h-sco1 protein.
Length = 301
Score = 30.3 bits (65), Expect = 9.1
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = -2
Query: 578 LDFVGYNQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHT 399
L+F G +G L + E W AS G C G PLS P PP + G
Sbjct: 27 LEFWGPAEGTARVLLRQFCARQAEAWRASGRPGYCLGTRPLSTAR---PPPPWSQKGPGD 83
Query: 398 ST 393
ST
Sbjct: 84 ST 85
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,275,829
Number of Sequences: 237096
Number of extensions: 3098546
Number of successful extensions: 8813
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 7816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8768
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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