Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H09
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal pro... 163 2e-40
U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 30 2.4
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 29 3.1
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 29 3.1
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 5.4
AF016679-4|AAB66158.1| 430|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 9.5
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 28 9.5
AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical ... 28 9.5
>AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 4 protein.
Length = 345
Score = 163 bits (395), Expect = 2e-40
Identities = 75/142 (52%), Positives = 97/142 (68%)
Frame = +3
Query: 372 AFGNMCRGGRMFAPTKPWRRWHRPVNXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPEL 551
AFGNMCRGG MFAP K +RRWHR VN QARGH+I+++ E+
Sbjct: 90 AFGNMCRGGHMFAPLKVFRRWHRNVNIAQKRYAVSSAIAASGIPALLQARGHVIDQVAEV 149
Query: 552 PLVVADKVQEINKTKQAVIFLRRLKAWSVILKVYKSQRLRAGKGKMRNRRRIQRKGPLIX 731
PLVV+DKV+ KTK+AV+FLRR W+ I KVY S+R RAGKGK+RNR+ Q+ GP++
Sbjct: 150 PLVVSDKVESFRKTKEAVVFLRRSHLWADIEKVYNSKRNRAGKGKLRNRQHKQKLGPVVI 209
Query: 732 FNKDQGLTRAFRNIPGVELLNV 797
+ +D RAFRNIPGV+++NV
Sbjct: 210 YGQDAECARAFRNIPGVDVMNV 231
Score = 82.2 bits (194), Expect = 4e-16
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQG 370
DLV+ + + +N RQ + V+ +AG Q SAESWGTGRAVARIPRVRGGGTHRSGQG
Sbjct: 34 DLVSFIADQVRRNRRQAHAVNTKAGKQHSAESWGTGRAVARIPRVRGGGTHRSGQG 89
>U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin
(drosophila neuroligin-like) homolog protein 1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -2
Query: 428 PPGLRGGEHTSTTTHVTEGXPD--RTYGYHHHGHAEFGQQHVRYPMIRHWF 282
P GLRG T T + + + R + YH + + +F Y RHW+
Sbjct: 550 PIGLRGINFTDTDRNASRTFSNIIRRFSYHQNPNFQFDGSWAAYEPRRHWY 600
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 455 SEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGH 333
+ +DG V A L G ++VT+ + + +HHHGH
Sbjct: 1451 ASLDGGVYAAGPLSGDAQNRLRSNVTDEKAVKKHHHHHHGH 1491
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 455 SEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGH 333
+ +DG V A L G ++VT+ + + +HHHGH
Sbjct: 1451 ASLDGGVYAAGPLSGDAQNRLRSNVTDEKAVKKHHHHHHGH 1491
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = -2
Query: 434 PAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGH---AEFGQQHVRYPMIRHWFGDQPPC 264
P PG R G H H +G +G+HHH H F H + W PPC
Sbjct: 388 PHCPG-RHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRPFPPHHGHHHFPPFW----PPC 442
>AF016679-4|AAB66158.1| 430|Caenorhabditis elegans Hypothetical
protein T28C12.3 protein.
Length = 430
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 794 IQELHTR--DVAESASQTLILVEXYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDN 636
++ LH + E + + L++++ +E + TL TTVA+F+L LK N
Sbjct: 291 LESLHIEILEFDEDSVKELVILDQWEEAKTLSLTTVAYFSLIVKHLYHFESLKFN 345
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 153 PAPSHSSLNTPTIKVGLPIDSFRYFSEAIPPKYT 52
P S +S N PTIK+ L I+ YF PK T
Sbjct: 184 PTTSSTSTNAPTIKITLNIND-AYFDSNCAPKCT 216
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAE 327
R SS R P E++GT A GG +TTT + G P + G ++
Sbjct: 23 RPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTT-ASSGAPAASSGGSSARYSS 81
Query: 326 FGQQH 312
G+ H
Sbjct: 82 SGRSH 86
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAE 327
R SS R P E++GT A GG +TTT + G P + G ++
Sbjct: 71 RPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTT-ASSGAPAASSGGSSARYSS 129
Query: 326 FGQQH 312
G+ H
Sbjct: 130 SGRSH 134
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAE 327
R SS R P E++GT A GG +TTT + G P + G ++
Sbjct: 23 RPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTT-ASSGAPAASSGGSSARYSS 81
Query: 326 FGQQH 312
G+ H
Sbjct: 82 SGRSH 86
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAE 327
R SS R P E++GT A GG +TTT + G P + G ++
Sbjct: 71 RPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTT-ASSGAPAASSGGSSARYSS 129
Query: 326 FGQQH 312
G+ H
Sbjct: 130 SGRSH 134
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = -2
Query: 506 RWDASSSNGCCQGRSPLSEVDGTVPAPPGLRGGEHTSTTTHVTEGXPDRTYGYHHHGHAE 327
R SS R P E++GT A GG +TTT + G P + G ++
Sbjct: 23 RPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTT-ASSGAPAASSGGSSARYSS 81
Query: 326 FGQQH 312
G+ H
Sbjct: 82 SGRSH 86
>AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical
protein Y62H9A.4 protein.
Length = 212
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 686 NAQPSSYPA*GTPHXLQQGSGSDSRFPQHPGCGAPE 793
N +S + + + L+ S SD R+P++PG AP+
Sbjct: 36 NRYSTSDSSDSSENELKSRSNSDERYPEYPGVYAPQ 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,066,034
Number of Sequences: 27780
Number of extensions: 431699
Number of successful extensions: 1307
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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