Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP03_FL5_H07
(814 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 108 8e-25
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 83 6e-17
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 56 8e-09
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 42 8e-05
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 42 1e-04
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 38 0.002
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.009
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 34 0.028
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 29 0.59
SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr 3|... 27 3.2
SPAC16.03c |ura2||dihydroorotase Ura2 |Schizosaccharomyces pombe... 27 4.2
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 27 4.2
SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase Vas1|Schizos... 26 7.3
SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr 1|... 25 9.7
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo... 25 9.7
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 25 9.7
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 25 9.7
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 108 bits (260), Expect = 8e-25
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = +3
Query: 432 VLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATAN 611
VLVA NFD++V D TK VLVEFYAPWCGHCK L P Y+KL E + +D +V++AKIDAT N
Sbjct: 359 VLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATEN 418
Query: 612 ELEHTKITSFPTIKLYSXDNQVTTTTAXG 698
++ I+ FPTI + +++V G
Sbjct: 419 DIS-VSISGFPTIMFFKANDKVNPVRYEG 446
Score = 56.4 bits (130), Expect = 5e-09
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 477 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDAT--ANELEHTKITSFPTI 650
K ++V+FYAPWCGHCK L P Y+ + E D + + ++D T + I +PT+
Sbjct: 40 KVLMVKFYAPWCGHCKALAPEYESAADELEK-DGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 651 KLYSXDNQVT 680
++ Q++
Sbjct: 99 NVFKNGKQIS 108
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 82.6 bits (195), Expect = 6e-17
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Frame = +3
Query: 435 LVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKI--DATA 608
L + NFD+VV D K VLVEFYA WCG+CK+L P Y+ LG+ F+N+ +V I KI D A
Sbjct: 145 LDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFA 204
Query: 609 NELEHTKITSFPTIKLYSXDNQ 674
+ ++ SFPTIK + D++
Sbjct: 205 DIGRLHEVASFPTIKFFPKDDK 226
Score = 73.3 bits (172), Expect = 4e-14
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = +3
Query: 411 WAAKPVKVLVAANFDEVVFDTTKKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIA 590
+A+ V++ + + + K L+EFYA WCGHCK L P+Y++LG FE+ +DV+I
Sbjct: 18 FASGVVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIG 77
Query: 591 KIDATANE--LEHTKITSFPTIKLYSXD 668
KIDA + + IT FPT+ + D
Sbjct: 78 KIDADTHSDVADKYHITGFPTLIWFPPD 105
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 55.6 bits (128), Expect = 8e-09
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 486 LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANE--LEHTKITSFPTIKL 656
LV FYAPWCG+CK+LVP Y KL + + V DA N ++ FPTIKL
Sbjct: 52 LVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKL 110
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 42.3 bits (95), Expect = 8e-05
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +3
Query: 477 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKL 656
K V+V+F+A WCG CK + P +++ + +D I +D + + + P+ L
Sbjct: 19 KLVVVDFFATWCGPCKAIAPKFEQFSNTY-SDATFIKVDVDQLSEIAAEAGVHAMPSFFL 77
Query: 657 YSXDNQVTTTTAXGXWPASPSSLXPTVKA 743
Y ++ A+P+ L ++KA
Sbjct: 78 YKNGEKIEEIVG-----ANPAKLEASIKA 101
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 477 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDATANELEHTKITSFPTIKL 656
K +V+FYA WCG CK L P +KL E I D ++ + + + PT+ L
Sbjct: 36 KVTVVDFYADWCGPCKYLKPFLEKLSEQ-NQKASFIAVNADKFSDIAQKNGVYALPTMVL 94
Query: 657 Y 659
+
Sbjct: 95 F 95
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 426 VKVLVAANFDEVVFDTTKKV-LVEFYAPWCGHCKQLVPIYDKLGEHFENDDDVIIAKIDA 602
V++ F E++ + +++ L+ FYAPW CKQ+ ++D+ + +N + KI+A
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKN---AVFLKIEA 59
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.5 bits (78), Expect = 0.009
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +3
Query: 489 VEFYAPWCGHCKQLVPIYDKLGEHFENDDDVII-AKIDATANELEHTKITSFPTIKLYSX 665
V+ YA WCG CK + P++ +L + + V +D + + PT +
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFEN 83
Query: 666 DNQVTTTT 689
Q+ T
Sbjct: 84 GKQIDMLT 91
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 489 VEFYAPWCGHCKQLVPIYDKLGEHFEND---DDVIIAKIDATANELEHTKITSFPTIKLY 659
+++Y P CG CK+L P++D + E + + ++D + I + PT+ LY
Sbjct: 47 IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLY 106
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 29.5 bits (63), Expect = 0.59
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 228 LQDPLVFIFVGIDGDGHDP-VAVGLRDRLQI 139
L+ P+ F FVG+DG GH P A RDR I
Sbjct: 762 LEAPIYFDFVGVDGVGHYPSKASEGRDRASI 792
>SPCC757.07c |ctt1|cta1|catalase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 657 YSXDNQVTTTTAXGXWPASPSSLXPTVK 740
YS D + G WP PSS+ P K
Sbjct: 371 YSRDGPMNVNGNQGNWPNYPSSIRPLAK 398
>SPAC16.03c |ura2||dihydroorotase Ura2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 337
Score = 26.6 bits (56), Expect = 4.2
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = +1
Query: 70 GKIKYHLLIFLSKKNGDFEKYLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGMKKD 249
G I H L +L++K+ + Y KPVAKT RDR I+A ++ + FFG D
Sbjct: 189 GTITAHHL-YLTQKDWQDDPYCF-CKPVAKTERDR--RALIEAATSKNPKF--FFG--SD 240
Query: 250 EVPSARLIALXT 285
P R L T
Sbjct: 241 SAPHPRSSKLKT 252
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 26.6 bits (56), Expect = 4.2
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = -3
Query: 269 RRADGTSSFFMPKNSKILWCSSSSASMATVMILSR*VFATGFKSSRYFSKSPFFLDKKIR 90
RR TSS K KI+W S + + I S V T F ++ F K FL I+
Sbjct: 484 RRNSSTSSGETGKGPKIVWFKPSDKRIPLIAISSDQVPPTFFTNNDDF-KDKVFL-AGIK 541
Query: 89 RW 84
RW
Sbjct: 542 RW 543
>SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase
Vas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 950
Score = 25.8 bits (54), Expect = 7.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 57 QDLWWKDQIPPSYLLIQEKW 116
+ +WW QIP +L ++KW
Sbjct: 441 RQIWWGHQIPVWKILEEDKW 460
>SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 112 NGDFEKYLEDLKPVAKTYRDRIMTVAI 192
NG FE+Y+E KT RD +++ +
Sbjct: 130 NGRFEQYMESTTLTCKTIRDPKLSIYV 156
>SPCC126.09 |||vacuolar membrane zinc transporter
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 418
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 128 FSKSPFFLDKKIRRWYLIFPPKILEAVSCENSTIVGM 18
F S +LDK + +W F ++L+ + +N+ + G+
Sbjct: 48 FGASGIYLDKLVNKW---FGYEVLDLANSDNALVTGL 81
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 85 HLLIFLSKKNGDFEKYLEDLKPVAKTYRDRIMTVAIDADEDEHQRILEFFGM 240
H L+ S NGDFEK + K + + ++ + ++E H ++L G+
Sbjct: 611 HSLVQDSIVNGDFEKAVLSAKEMEVLCENNDLSKQLTSEEIVHMKLLIQLGL 662
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 387 LSEDLPSDWAAKPVKVLVAANFDEVVFDTT 476
L+E+LPS AAKP V+ N V D T
Sbjct: 332 LTENLPSGSAAKPGDVIFMRNGLSVEIDNT 361
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,707,101
Number of Sequences: 5004
Number of extensions: 51840
Number of successful extensions: 199
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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